Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Studies of fungal diversity in West Pacific

PROVIDER: PRJNA542503 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR9047556_1.fastq.gz	Fastqsanger.gz
	SRR9047556_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 2 of 2

Similar Datasets

Project description:Studies of fungal diversity in West Pacific-2

| PRJNA542508 | ENA

Project description:West Pacific sediments

| PRJNA629774 | ENA

Project description:West Pacific sediments

| PRJNA629767 | ENA

West Pacific Ocean rbcL gene diversity

Project description:West Pacific Ocean rbcL gene diversity Raw sequence reads

| PRJNA556599 | ENA

West Pacific Ocean rbcL gene diversity

Project description:West Pacific Ocean rbcL gene diversity Raw sequence reads

| PRJNA557821 | ENA

Inter and intra-lineage genetic diversity of Zika virus differs for American isolates

Project description:Zika virus (ZIKV) is a mosquito-transmitted positive-sense RNA virus in the family Flaviviridae. ZIKV infections are associated with neurodevelopmental deficiencies termed Congenital Zika Syndrome. ZIKV strains are grouped into three phylogenetic lineages: East African, West African, and Asian, which contains the American lineage. RNA virus genomes exist as genetically-related sequences. The heterogeneity of these viral populations is implicated in viral fitness, and genome diversity is correlated to virulence. This study examines genetic diversity of representative ZIKV strains from all lineages utilizing next generation sequencing (NGS). Inter-lineage diversity results indicate that ZIKV lineages differ broadly from each other; however, intra-lineage comparisons of American ZIKV strains isolated from human serum or placenta show differences in diversity when compared to ZIKVs from Asia and West Africa. This study describes the first comprehensive NGS analysis of all ZIKV lineages and posits that sub-consensus-level diversity may provide a framework for understanding ZIKV fitness during infection.

2018-12-31 | E-MTAB-5945 | biostudies-arrayexpress

Project description:Studies of nitrogen deposition on fungal diversity

| PRJNA1021779 | ENA

Project description:Studies of Fungal Diversity from Arctic Sample

| PRJNA480134 | ENA

Project description:Studies of fungal diversity on marine aerosols from the Northwest Pacific Ocean to the Arctic Ocean

| PRJNA1018847 | ENA

Project description:studies of fungal diversity and composition on soil

| PRJNA719463 | ENA