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Gallus gallus breed:Cobb500

ABSTRACT: RNA-seq analysis reveals spatial and sex differences in pectoralis major muscle of broiler chickens contributing to difference in susceptibility to wooden breast disease

PROVIDER: PRJNA543674 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR9089690_1.fastq.gz	Fastqsanger.gz
	SRR9089690_2.fastq.gz	Fastqsanger.gz
	SRR9089691_1.fastq.gz	Fastqsanger.gz
	SRR9089691_2.fastq.gz	Fastqsanger.gz
	SRR9089692_1.fastq.gz	Fastqsanger.gz

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Single-cell analysis reveals gene expression profiles and cell types in wooden breast myopathy

Project description:Wooden Breast (WB) is a novel myopathy affecting the pectoralis major muscle of modern broiler chickens. We selected pectoralis fillet samples, a normal(healthy) fillet and a WB fillet.

2022-04-13 | GSE200516 | GEO

Gallus gallus breed:Commercial broilers-Cobb500

Project description:Genetic Basis of Wooden Breast and White Striping in Commercial Broiler Chickens

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Project description:Detection of differentially expressed genes in broiler Pectoralis major muscle affected by White Striping – Wooden Breast myopathies

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Transcriptome analysis of post-hatch breast muscle in legacy and modern broiler chickens reveals enrichment of several regulators of myogenic growth

Project description:We report the results of comparative transcriptional profiling in the pectoralis major muscle of a modern production broiler line (Ross 708) and a legacy broiler line inbred since the late 1940s (Illinois) focusing on metabolic differences and differences in myogenic growth regulators Differential gene expression analysis between Ross 708 and Illinois pectoralis major at two post-hatch time points (D6 and D21) that bracket critical inflection point in the allometric growth characteristics of the muscle

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Muscle transcriptional profiles of chickens from slow and fast growing lines with different degree of WS and WB myopathies

Project description:Broiler industry is facing an increasing prevalence of breast myopathies such as white striping (WS) and wooden breast (WB), whose precise etiology remains poorly understood. In order to progress in the understanding of the structural changes and the molecular pathways involved in these myopathies, and identify biomarkers, a transcriptomic analysis using an 8×60K Agilent chicken microarray was performed. The study used pectoralis major muscles from three groups: slow-growing animals (n=8), fast-growing animals visually free from defects (n=8) or severely affected by both WS and WB (n=8). In addition, a weighted correlation network analysis was performed to investigate the relationship between modules of co-expressed genes and histological traits.

2019-10-18 | GSE127806 | GEO

Transcriptome analysis of post-hatch breast muscle in legacy and modern broiler chickens reveals enrichment of several regulators of myogenic growth

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Project description:Expression data from chicken Pectoralis major

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Gallus gallus breed:Broiler

Project description:Gene Expression Profiling of the Early Pathogenesis of Wooden Breast Disease In Commercial Broiler Chickens Using RNA-Sequencing

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CUT&Tag for analysis of Nrf2-regulated genes in liver of heat-stressed chicken (Gallus gallus)

Project description:The aim of the present study was to investigated the difference of Nrf2-regulated genes in livers between normal and heat-stressed chickens. The CUT&Tag and high-throughput sequencing technologies were used in this experiment. Results showed that 13171838- 15417444 clean reads were obtained in this study. These data suggested that there were many Nrf2- regulated genes in the liver of heat-stressed chicken.

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