Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Paenibacillus thiaminolyticus strain:NRRL B-4156

ABSTRACT: Paenibacillus thiaminolyticus NRRL B-4156 Assembly

PROVIDER: PRJNA552222 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	SRR11306241_1.fastq.gz	Fastqsanger.gz
	SRR17695975_1.fastq.gz	Fastqsanger.gz
	SRR17695975_2.fastq.gz	Fastqsanger.gz
	SRR17695976_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 34

Similar Datasets

Paenibacillus thiaminolyticus strain:NRRL B-4156

Project description:Paenibacillus thiaminolyticus strain:NRRL B-4156 Genome sequencing and assembly

| PRJNA382555 | ENA

Paenibacillus thiaminolyticus strain:Mbale

Project description:Paenibacillus thiaminolyticus Mbale Assembly

| PRJNA552221 | ENA

Paenibacillus thiaminolyticus

Project description:Paenibacillus thiaminolyticus overview

| PRJNA389136 | ENA

Paenibacillus thiaminolyticus strain:BO5

Project description:Paenibacillus thiaminolyticus strain:BO5 Genome sequencing and assembly

| PRJNA478128 | ENA

Paenibacillus thiaminolyticus strain:SY20

Project description:Paenibacillus thiaminolyticus strain:SY20 Genome sequencing

| PRJNA847012 | ENA

Paenibacillus thiaminolyticus strain:NNS5-6

Project description:Paenibacillus thiaminolyticus strain:NNS5-6 Genome sequencing

| PRJNA1127024 | ENA

Complete Genome Sequences of the Human Pathogen Paenibacillus thiaminolyticus Mbale and Type Strain P. thiaminolyticus NRRL B-4156.

Project description:We have isolated a likely bacterial pathogen from cerebrospinal fluid from a Ugandan infant suffering from hydrocephalus. Whole-genome sequencing and assembly of the genome of the clinical isolate, as well as that of a previously deposited reference strain, identified the isolate as Paenibacillus thiaminolyticus, which has not been associated with widespread human infections.

| S-EPMC7380522 | biostudies-literature

Paenibacillus thiaminolyticus NBRC 15656 = DSM 7262

Project description:Paenibacillus thiaminolyticus NBRC 15656 genome sequencing project

| PRJDB1379 | ENA

Genomic insights into the thiamin metabolism of Paenibacillus thiaminolyticus NRRL B-4156 and P. apiarius NRRL B-23460.

Project description:Paenibacillus thiaminolyticus is the model organism for studying thiaminase I, an enigmatic extracellular enzyme. Originally isolated from the feces of clinical patients suffering from thiamin deficiency, P. thiaminolyticus has been implicated in thiamin deficiencies in humans and other animals due to its ability to produce this thiamin-degrading enzyme. Its close relative, P. apiarius, also produces thiaminase I and was originally isolated from dead honeybee larvae, though it has not been reported to be a honeybee pathogen. We generated draft genomes of the type strains of both species, P. thiaminolyticus NRRL B-4156 and P. apiarius NRRL B-23460, to deeply explore potential routes of thiamin metabolism. We discovered that the thiaminase I gene is located in a highly conserved operon with thiamin biosynthesis and salvage genes, as well as genes involved in the biosynthesis of the antibiotic bacimethrin. Based on metabolic pathway predictions, P. apiarius NRRL B-23460 has the genomic capacity to synthesize thiamin de novo using a pathway that is rarely seen in bacteria, but P. thiaminolyticus NRRL B-4156 is a thiamin auxotroph. Both genomes encode importers for thiamin and the pyrimidine moiety of thiamin, as well as enzymes to synthesize thiamin from pyrimidine and thiazole.

| S-EPMC5627462 | biostudies-literature

Paenibacillus apiarius strain:NRRL B-23460

Project description:Paenibacillus apiarius strain:NRRL B-23460 Genome sequencing and assembly

| PRJNA382554 | ENA