Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Clitoria ternatea isolate:Multiple tissues

ABSTRACT: Clitoria ternatea isolate:Multiple tissues Transcriptome or Gene expression

PROVIDER: PRJNA573557 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR10260257_1.fastq.gz	Fastqsanger.gz
	SRR10260257_2.fastq.gz	Fastqsanger.gz
	SRR10260258_1.fastq.gz	Fastqsanger.gz
	SRR10260258_2.fastq.gz	Fastqsanger.gz
	SRR10260259_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 32

Similar Datasets

Clitoria ternatea

Project description:Clitoria ternatea overview

| PRJNA295239 | ENA

Clitoria ternatea

Project description:Clitoria ternatea Transcriptome or Gene expression

| PRJNA263704 | ENA

Clitoria ternatea

Project description:Clitoria ternatea Transcriptome or Gene expression

| PRJNA648284 | ENA

Clitoria ternatea

Project description:Clitoria ternatea Transcriptome or Gene expression

| PRJNA295108 | ENA

Clitoria ternatea isolate:LY-2023

Project description:Genome sequencing and assembly of Clitoria ternatea

| PRJNA1016062 | ENA

Clitoria ternatea cultivar:Milgarra

Project description:Clitoria ternatea cultivar:Milgarra Transcriptome or Gene expression

| PRJNA286977 | ENA

Clitoria ternatea breed:Single Blue

Project description:Clitoria ternatea Genome sequencing and chromosome level assembly

| PRJNA1172151 | ENA

NIA/NIH AGEMAP Multiple Tissues

Project description:NIA/NIH AGEMAP Multiple Tissues

| PRJNA103897 | ENA

Crystal structure of UDP-glucose:anthocyanidin 3-O-glucosyltransferase from Clitoria ternatea.

Project description:Flowers of the butterfly pea (Clitoria ternatea) accumulate a group of polyacylated anthocyanins, named ternatins, in their petals. The first step in ternatin biosynthesis is the transfer of glucose from UDP-glucose to anthocyanidins such as delphinidin, a reaction catalyzed in C. ternatea by UDP-glucose:anthocyanidin 3-O-glucosyltransferase (Ct3GT-A; AB185904). To elucidate the structure-function relationship of Ct3GT-A, recombinant Ct3GT-A was expressed in Escherichia coli and its tertiary structure was determined to 1.85 Å resolution by using X-ray crystallography. The structure of Ct3GT-A shows a common folding topology, the GT-B fold, comprised of two Rossmann-like ?/?/? domains and a cleft located between the N- and C-domains containing two cavities that are used as binding sites for the donor (UDP-Glc) and acceptor substrates. By comparing the structure of Ct3GT-A with that of the flavonoid glycosyltransferase VvGT1 from red grape (Vitis vinifera) in complex with UDP-2-deoxy-2-fluoro glucose and kaempferol, locations of the catalytic His-Asp dyad and the residues involved in recognizing UDP-2-deoxy-2-fluoro glucose were essentially identical in Ct3GT-A, but certain residues of VvGT1 involved in binding kaempferol were found to be substituted in Ct3GT-A. These findings are important for understanding the differentiation of acceptor-substrate recognition in these two enzymes.

| S-EPMC3795551 | biostudies-literature

Isolation and characterization of rhizobia from nodules of Clitoria ternatea in Thailand.

Project description:Rhizobia were isolated from the root nodules of Clitoria ternatea in Thailand. The phylogeny of the isolates was investigated using 16S rDNA and the internal transcribed spacer (ITS) region from 16S to 23S rDNA. The phylogenetic tree of the 16S rDNA showed that ten of the eleven isolates belonged to Bradyrhizobium elkanii, and one belonged to Bradyrhizobium japonicum. The topology of the ITS tree was similar to that of 16S rDNA. The acetylene reduction activity was higher for the nodules inoculated with the isolated B. elkanii strains than for those inoculated with B. japonicum strains. When C. ternatea plants were inoculated with various Bradyrhizobium USDA strains isolated from Glycine max, C. ternatea formed many effective nodules with B. elkanii, especially USDA61. However, acetylene reduction activity per plant and the growth were higher in C. ternatea inoculated with our isolates. From these data we propose that effective rhizobia inoculant were identified for C. ternatea cultivation.

| S-EPMC6879394 | biostudies-literature

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data