Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Fungal diversity of a Hydrothermal vent field at Kueishan Island

PROVIDER: PRJNA574255 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR10189077.fastq.gz	Fastqsanger.gz
	SRR10189077_1.fastq.gz	Fastqsanger.gz
	SRR10189077_2.fastq.gz	Fastqsanger.gz
	SRR10189078.fastq.gz	Fastqsanger.gz
	SRR10189078_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 39

Similar Datasets

Temporal gill transcriptome of the deep-sea mussel Bathymodiolus azoricus in situ and in the laboratory

Project description:The project was designed to explore biological rhythms in the hydrothermal vent mussel Bathymodiolus azoricus. The experiment provides the first high-resolution temporal transcriptomes of an hydrothermal species, both in situ and in the laboratory. For each condition, 5 mussels were sampled every 2h 4min for 24h 48min.

2020-06-12 | E-MTAB-8451 | biostudies-arrayexpress

Sulfur-rich sediments collected from shallow-water hydrothermal vent of Kueishan Island (Taiwan)

Project description:Sulfur-rich sediments collected from shallow-water hydrothermal vent of Kueishan Island (Taiwan) Assembly

| PRJNA853916 | ENA

Sulfur-rich sediments collected from shallow-water hydrothermal vent of Kueishan Island (Taiwan)

Project description:Sulfur-rich sediments collected from shallow-water hydrothermal vent of Kueishan Island (Taiwan) Assembly

| PRJNA855887 | ENA

Proteogenomic characterization of microbial communities fueled by metal-sulfide oxidation of inactive hydrothermal chimneys

Project description:Iron-sulfur minerals such as pyrite are found in many marine benthic habitats. At deep-sea hydrothermal vent sites they occur as massive sulfide chimneys. Hydrothermal chimneys formed by mineral precipitation from reduced vent fluids upon mixing with cold oxygenated sea water. While microorganisms inhabiting actively venting chimneys and utilizing reduced compounds dissolved in the fluids for energy generation are well studied, only little is known about the microorganisms inhabiting inactive sulfide chimneys. We performed a comprehensive meta-proteogenomic analysis combined with radiometric dating to investigate the diversity and function of microbial communities found on inactive sulfide chimneys of different ages from the Manus Basin (SW Pacific). Our study sheds light on potential lifestyles and ecological niches of yet poorly described bacterial clades dominating inactive chimney communities.

2019-01-02 | PXD010074 | Pride

hydrothermal vent metagenome

Project description:Milos Island hydrothermal vent metagenome

| PRJNA530185 | ENA

Sulfur-rich sediments collected from shallow-water hydrothermal vent of Kueishan Island (Taiwan)

Project description:Sulfur-rich sediments collected from shallow-water hydrothermal vent of Kueishan Island (Taiwan) Raw sequence reads

| PRJNA851985 | ENA

Metaproteome analysis of hydrothermal vent chimney biofilms

Project description:At hydrothermal vent sites, chimneys consisting of sulfides, sulfates, and oxides are formed upon contact of reduced hydrothermal fluids with oxygenated seawater. The walls and surfaces of these chimneys are an important habitat for vent-associated microorganisms. We used community proteogenomics to investigate and compare the composition and in situ protein expression of microbial communities colonizing two actively venting hydrothermal chimneys from the Manus Basin back-arc spreading center (Papua New Guinea).

2018-04-27 | PXD009105 | Pride

Hydrothermal vent metagenome - AEGIR hydrothermal vent field - GS20-ROV9-BS1

Project description:Hydrothermal vent metagenome - AEGIR hydrothermal vent field - GS20-ROV9-BS1 Metagenomic assembly

| PRJNA881934 | ENA

Genomics insights into high pressure adaptation in a Thermococcus sp. from the world’s deepest hydrothermal vents

Project description:The present study describes the isolation of a Thermococcus sp. strain 175 from the world‘s deepest hydrothermal vent sites known thus far – The Mid-Cayman Rise.consisting of two hydrothermal venting systems Bee Bee (or Piccard), at 4950m depth and Von Damm (or Walsh) at 2300m The strain is capable of growth over 0.1MPa (atm. Pressure) to 120MPa, the widest known range of pressure dependent growth. The study further explores piezophilic adaptation using comparative genomic tools. Insights into the transcriptome of this strain providers the first look into the transcriptional machinery of peizophilic Thermococci.

2017-08-22 | GSE70228 | GEO

Sulfur-rich sediments collected from shallow-water hydrothermal vent of Kueishan Island (Taiwan)

Project description:Sulfur-rich sediments collected from shallow-water hydrothermal vent of Kueishan Island (Taiwan) metagenomic Raw sequence reads

| PRJNA847634 | ENA

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data