Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Sorghum bicolor cultivar:BTx642

ABSTRACT: Sorghum bicolor BTx642 Standard Draft genome sequencing

PROVIDER: PRJNA585754 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR10566512_subreads.fastq.gz	Fastqsanger.gz
	SRR10566513_subreads.fastq.gz	Fastqsanger.gz
	SRR10566514_subreads.fastq.gz	Fastqsanger.gz
	SRR10566515_1.fastq.gz	Fastqsanger.gz
	SRR10566515_2.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 13

Similar Datasets

Tissue specific expression data in Sorghum bicolor BTx623

Project description:This study used with RNA-Seq to examine the tissue specific expression data within sorghum plants for improving the Sorghum bicolor gene annotation. We examined the RNA from tissues (spikelet, seed and stem) in Sorghum bicolor (BTx623).Total RNAs form each tissues were extracted using SDS/phenol method followed by LiCl purification

2015-03-11 | E-MTAB-4273 | biostudies-arrayexpress

RNA-Seq and BS-Seq of Sorghum bicolor tissues

Project description:This study utilized next generation sequencing technology (RNA-Seq and BS-Seq) to examine the transcriptome and methylome of various tissues within sorghum plants with the ultimate goal of improving the Sorghum bicolor annotation We examined the mRNA of various Sorghum bicolor (BTx623) tissues (flowers, vegitative and floral meristems, embryos, roots and shoots) and bisulfite treated DNA from two root samples

2014-08-29 | E-GEOD-50464 | biostudies-arrayexpress

Sorghum bicolor and Setaria viridis PARE-seq

Project description:Parallel Analysis of RNA Ends (PARE) sequencing reads were generated to validate putative microRNAs and identify cleavage sites in Sorghum bicolor and Setaria viridis.

2020-05-19 | GSE150798 | GEO

RNA-Seq and BS-Seq of Sorghum bicolor tissues

2014-08-29 | GSE50464 | GEO

RNA-Seq and BS-Seq of Sorghum bicolor tissues

Project description:This experiment contains the subset of data corresponding to sorghum RNA-Seq data from experiment E-GEOD-50464 (http://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-50464/), which goal is to examine the transcriptome of various Sorghum bicolor (BTx623) tissues: flowers, vegetative and floral meristems, embryos, roots and shoots. Thus, we expanded the existing transcriptome atlas for sorghum by conducting RNA-Seq analysis on meristematic tissues, florets, and embryos, and these data sets have been used to improve on the existing community structural annotations.

2014-08-29 | E-MTAB-3839 | biostudies-arrayexpress

Sorghum bicolor cultivar:BTx642

Project description:Sorghum bicolor BTx642 Transcriptome - BTX642ROOT

| PRJNA583225 | ENA

Sorghum bicolor cultivar:BTx642

Project description:Sorghum bicolor BTx642 Transcriptome - BTX642STEM

| PRJNA583226 | ENA

Sorghum bicolor cultivar:BTx642

Project description:Sorghum bicolor BTx642 Transcriptome - BTX642LEAF

| PRJNA583227 | ENA

Sorghum bicolor cultivar:BTx642

Project description:Sorghum bicolor BTx642 Transcriptome - BTX642FLOWER