Project description:Nodulation Outer Protein P (NopP) and NopI of the type 3 secretion system (T3SS) of the rhizobium determine host specificity. Sinorhizobium fredii CCBAU25509 (R2) and CCBAU45436 (R4) have different NopP and NopI variants, affecting their respective symbiotic compatibilities with the cultivated soybean C08 and the wild soybean W05. Swapping the NopP variants between R2 and R4 has been shown to switch their compatibility with C08 with the rj2/Rfg1 genotype. To understand the effects of Nops on host compatibility, analyses on the transcriptomic data of W05 roots and nodules inoculated with S. fredii strains containing Nop variants uncovered many differentially expressed genes related to nodulation and nodule functions, providing important information on the effects of Nops on hosts and nodules.

2024-08-18 | GSE274768 | GEO

Glycine max strain:Sinorhizobium fredii CCBAU45436 | cultivar:C08

Project description:RNAseq of Glycine max C08 inoculated with Sinorhizobium fredii CCBAU45436

| PRJNA626514 | ENA

Sinorhizobium fredii HH103

Project description:Sinorhizobium fredii HH103 Transcriptome

| PRJNA313151 | ENA

Glycine soja strain:Sinorhizobium fredii CCBAU45436 | cultivar:W05

Project description:SmRNAseq of Glycine soja root and nodule inoculated with Sinorhizobium fredii

| PRJNA670312 | ENA

Sinorhizobium fredii HH103

Project description:Sinorhizobium fredii mucR1 mutant Transcriptome