Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

RNA Seq Analysis of BMSC cell line Transcriptomes under the different conditions.

ABSTRACT: RNA Seq Analysis of BMSC cell line Transcriptomes under the different conditions.

PROVIDER: PRJNA609920 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR11218202_1.fastq.gz	Fastqsanger.gz
	SRR11218202_2.fastq.gz	Fastqsanger.gz
	SRR11218203_1.fastq.gz	Fastqsanger.gz
	SRR11218203_2.fastq.gz	Fastqsanger.gz
	SRR11218204_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 30

Similar Datasets

RNA Seq Analysis of BMSC cell line Transcriptomes under the different conditions.

Project description:The goal of this study are to compare the transcriptome profiling (RNA-seq) of rat bone marrow mesenchymal stem cells (BMSC) transcriptome profiling (RNA-seq) under the condition of infection of different lentiviruses(shRac1 or shLuci) and/or oxygen-glucose deprivation (OGD).

2023-02-02 | GSE146261 | GEO

Transcriptomes of OSCC cells treated with CGRP under different culture conditions

Project description:We compared the transcriptomes of OSCC cells (Cal27 cell line) with or without treatment of CGRP under different culture conditions.

2022-05-14 | GSE191100 | GEO

Expression data in Wheat TGMS line BS366 under different conditions

Project description:Expression data in Wheat TGMS line BS366 under different conditions

| PRJNA823028 | ENA

Transcriptomes of OSCC cells treated with CGRP under different culture conditions

Project description:Transcriptomes of OSCC cells treated with CGRP under different culture conditions

| PRJNA789677 | ENA

Prostate Cancer Cell Line Transcriptomes

Project description:Prostate Cancer Cell Line Transcriptomes

| PRJNA871891 | ENA

A Global Transcriptome Analysis of BMSC Senescence

Project description:Bone marrow stromal cells (BMSCs) can be expanded by serial passage, but expansion is limited by cell senescence. The nature of changes associated with BMSC serial passages was assessed. Transcriptome analysis of 10 early and 15 late passage samples from 5 subjects revealed 2193 differentially expressed genes; those highly expressed in early passage cells were overrepresented in skeletal system development, embryonic morphogenesis, tube morphogenesis, etc, while those highly expressed in the late passage BMSCs were overrepresented in nucleosome assembly; chromatin assembly, DNA packaging, etc. 57 BMSC samples from 7 donors were further analyzed for the transition from an early to late passage; 155 genes were highly correlated with BMSC senescence and a set of 24 genes was predictive of BMSCs lifespan. The change from an early to a late passage molecular signature occurred between passage 3 and 5. In contrast, senescence associated beta-galactosidase staining began to increase after passage 6 or 7 and colony formation efficiency began to fall after passage 7. These data indicated that the onset of molecular changes associated with BMSC passage varied among individuals and preceded changes in commonly used indicators of BMSC senescence. The set of 24 BMSC lifespan predictive genes will be useful in assessing the quality of clinical BMSC products.

2013-11-21 | GSE34303 | GEO

Expression data in Wheat TGMS line BS366 under different conditions

Project description:The male sterility of a wheat thermosensitive genic male sterile (TGMS) line is strictly controlled by temperature. We used microarrays to identify genes that play pivotal roles in anthers during cold-stress hypersensitivity. The expression of genes in response to different temperature treatment were analyzed for anthers of BS366.

2022-08-03 | GSE200128 | GEO

Transcriptomes in Human neuroblastoma cell line SH-SY5Y under oxidative stress conditions

Project description:The SH-SY5Y Human neuroblastoma cell line was subcloned from the SK-N-SH cell line, which has been isolated from a bone marrow biopsy of a 4 year-old female patient. To examine the overall distribution of gene expression under stress condition in human neuronal cells, we investigated changes in the transcriptome profiles in the SH-SY5Y cells exposed with sodium arsenite which causes oxidative stress. We detected changes in the expression levels for several genes including FOS and Jun, which are well-known stress-dependent upregulated genes.

2023-06-20 | GSE188397 | GEO

Analysis of human neurotrophins and receptors in bone marrow stromal cells (BMSC) treated with NGF or BDNF

Project description:BMSC gene expression profiling was completed to examine the baseline neurotrophin and receptor gene expression in BMSC and to evaulate changes in gene expression in response to NGF or BDNF stimulation In the study, primary BMSC were treated with recombinant human NGF or BDNF for 24 hours. Following treatment, RNA isolated from the BMSC were analyzed using the Human Neurotrophin and Receptor Gene Array HS-018

2010-05-01 | E-GEOD-18537 | biostudies-arrayexpress

Transcriptome-wide expression analyses of HCT116 cell line under 5 conditions

Project description:Transcriptome-wide expression analyses of HCT116 cell line under 5 conditions

| PRJNA438163 | ENA