Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

RNA sequencing of peritoneal macrophages from wild-type and SHP2lyz2-/- mice

ABSTRACT: RNA sequencing of peritoneal macrophages from wild-type and SHP2lyz2-/- mice

PROVIDER: PRJNA615196 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR11424124_1.fastq.gz	Fastqsanger.gz
	SRR11424124_2.fastq.gz	Fastqsanger.gz
	SRR11424125_1.fastq.gz	Fastqsanger.gz
	SRR11424125_2.fastq.gz	Fastqsanger.gz
	SRR11424126_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 18

Similar Datasets

Gene expression profile (RNAseq) of wild-type and Zeb1 (+/-) peritoneal mouse macrophages

Project description:Purpose: Characterize the gene expression profile of wild-type and Zeb1 (+/-) peritoneal mouse macrophages through RNA sequencing Methods: RNA sequencing of RNA from peritoneal macrophages isolated by peritoneal lavage and FACS sorting (F4/80+ CD11b+) from wild-type and Zeb1 (+/-) mice (2 mice pooled for each sample/set) Results: Wild-type and Zeb1 (+/-) peritoneal mouse macrophages display differential gene expression. Zeb1 (+/-) peritoneal macrophages express lower levels of SPM (F4/80low)-associated genes Conclusions: Wild-type and Zeb1 (+/-) peritoneal mouse macrophages display differential gene expression. Zeb1 (+/-) peritoneal macrophages express lower levels of SPM (F4/80low)-associated genes

2019-05-24 | GSE103830 | GEO

RNA sequencing of peritoneal macrophages from wild-type and SHP2lyz2-/- mice

Project description:We report the application of RNA sequencing technology for high-throughput profiling in mouse peritoneal macrophages derived from wild type and SHP2lyz2-/- mice. The goal of this study is to search differential gene in indicated groups. Through differential gene analysis, we can find out the specific mechanism of SHP2 deficiency to alleviate disease development.

2021-12-17 | GSE147535 | GEO

Transcriptional Analysis of Wild Type and KLF4-/- Peritoneal Macrophages

Project description:Transcriptional Analysis of Wild Type and KLF4-/- Peritoneal Macrophages

| PRJNA418788 | ENA

Next Generation Sequencing of Wild Type and RXRa-/- peritoneal cavity macrophages

Project description:Next Generation Sequencing of Wild Type and RXRa-/- peritoneal cavity macrophages

| PRJNA530511 | ENA

mRNA-seq of wild-type or Eral1 deficient primary peritoneal macrophages (PMs) after sendai virus infection

Project description:Analysis of mRNA-seq reveals how wild-type and Eral1 deficient peritoneal macrophages response to SeV infection

2020-11-20 | GSE161809 | GEO

Expression data from wild type and Gata6-deficient tissue resident peritoneal macrophages

Project description:Tissue resident macrophages are notoriously heterogeneous, exhibiting discrete phenotypes as a consequence of tissue- and micro-anatomical niche-specific functions, but the molecular basis for this is not understood. We resolved a restricted transcriptional profile for the self-renewing population of peritoneal resident macrophages, which is expressed during homeostasis and inflammation and distinct from other MØ. Prominent within this profile was the expression of Gata6. This study represents a characterisation of the role of Gata6 in peritoneal resident macrophage phenotype. We used microarrays to determine the patterns of gene expression in peritoneal resident MØ in the absence of GATA-6 against wild type.

2014-05-09 | GSE47049 | GEO

microRNA transcriptome data from wild type and Gata6-deficient tissue resident peritoneal macrophages

Project description:microRNA transcriptome data from wild type and Gata6-deficient tissue resident peritoneal macrophages. Tissue resident macrophages are notoriously heterogeneous, exhibiting discrete phenotypes as a consequence of tissue- and micro-anatomical niche-specific functions, but the molecular basis for this is not understood. Gata6 itself has been shown to be a target of multiple miR. However, microRNA transcriptome and its dependence on tissue-specific macrophage programming, such as effected by GATA6, has not been explored. We used microRNA sequencing to determine the patterns of microRNA expression in peritoneal resident macrophages at homeostasis in the absence of GATA-6 against wild type.

2023-06-30 | E-MTAB-13039 | biostudies-arrayexpress

Expression data from wild type and Gata6-deficient tissue resident peritoneal macrophages

Project description:Tissue resident macrophages are notoriously heterogeneous, exhibiting discrete phenotypes as a consequence of tissue- and micro-anatomical niche-specific functions, but the molecular basis for this is not understood. We resolved a restricted transcriptional profile for the self-renewing population of peritoneal resident macrophages, which is expressed during homeostasis and inflammation and distinct from other MM-CM-^X. Prominent within this profile was the expression of Gata6. This study represents a characterisation of the role of Gata6 in peritoneal resident macrophage phenotype. We used microarrays to determine the patterns of gene expression in peritoneal resident MM-CM-^X in the absence of GATA-6 against wild type. Conditional 'floxed' Gata6 deficient sex-matched mice between 7 weeks old were compared against wild type

2014-05-09 | E-GEOD-47049 | biostudies-arrayexpress

Gene expression profile (RNAseq) of wild-type and Zeb1 (+/-) peritoneal mouse macrophages

Project description:Gene expression profile (RNAseq) of wild-type and Zeb1 (+/-) peritoneal mouse macrophages

| PRJNA407798 | ENA

RNA-seq analysis of wild type and Tim-4 KO mice primary peritoneal macrophages

Project description:RNA-seq analysis of wild type and Tim-4 KO mice primary peritoneal macrophages

| PRJNA885039 | ENA