Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Strawberry lethal yellows phytoplasma (CPA) str. NZSb11

ABSTRACT: Strawberry lethal yellows phytoplasma (CPA) str. NZSb11 genome sequencing project

PROVIDER: PRJNA62247 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	GCA_000397185.1_sequence_report.txt	Txt

Items per page:

1 - 1 of 1

Similar Datasets

Aster yellows phytoplasma

Project description:Aster yellows phytoplasma overview

| PRJNA188006 | ENA

Small RNA profiling of aster yellows infected Catharanthus roseus plants

Project description:Aster yellows phytoplasma strain Hyd35 (16SrI-B) in micropropagated periwinkle shoots in collection was used to produce infected plants in pots that were separated according to the diverse symptomatology i.e. phyllody and witches’ broom. Small RNA high-throughput sequencing (HTS) was then used to determine the small RNA pattern of these plants. Bioinformatics analysis revealed the presence of expression changes of different miRNA classes and the presence of phytoplasma derived small RNAs. These results could complement previous studies and serve as a starting point for small RNA omics in phytoplasma research

2023-08-11 | GSE213754 | GEO

North American Grapevine Yellows Phytoplasma

Project description:A 'Candidatus Phytoplasma pruni'-related strain associated with North American Grapevine Yellows Metagenomic assembly

| PRJNA1090061 | ENA

New Jersey aster yellows phytoplasma strain:NJAY

Project description:New Jersey aster yellows phytoplasma strain:NJAY Genome sequencing and assembly

| PRJNA327174 | ENA

'Catharanthus roseus' aster yellows phytoplasma strain:De Villa

Project description:'Catharanthus roseus' aster yellows phytoplasma strain:De Villa Genome sequencing

| PRJNA522055 | ENA

Grapevine comparative early transcriptome profiling reveals that Flavescence dorée phytoplasma represses plant responses induced by vector feeding in susceptible varieties

Project description:Flavescence dorée is the most serious grapevine yellows disease in Europe. It is caused by phytoplasmas which are transmitted from grapevine to grapevine by the leafhopper Scaphoideus titanus. Differences in susceptibility among grapevine varieties suggest the existence of specific genetic features associated with resistance to the phytoplasma and/or possibly with its vector. In this work, RNA-Seq was used to compare early transcriptional changes occurring during the three-trophic interaction between the phytoplasma, its vector and the grapevine, represented by two different cultivars, one very susceptible to the disease and the other scarcely susceptible. Background: Flavescence dorée is the most serious grapevine yellows disease in Europe. It is caused by phytoplasmas which are transmitted from grapevine to grapevine by the leafhopper Scaphoideus titanus. Differences in susceptibility among grapevine varieties suggest the existence of specific genetic features associated with resistance to the phytoplasma and/or possibly with its vector. In this work, RNA-Seq was used to compare early transcriptional changes occurring during the three-trophic interaction between the phytoplasma, its vector and the grapevine, represented by two different cultivars, one very susceptible to the disease and the other scarcely susceptible. The comparison of the transcriptomic responses highlighted both passive and active defense mechanisms against the vector and/or the pathogen in the scarcely-susceptible variety, as well as the capacity of the phytoplasmas to repress the defense reaction against the insect in the susceptible variety.

2019-06-13 | E-MTAB-7710 | biostudies-arrayexpress

phytoplasma in plants vs. phytoplasma in insects (co-hybridizations)

Project description:Transcriptional profiling of phytoplasma grown in plant (Chrysanthemum coronarium) and grown in insect (Macrosteles striifrons). Two-condition experiment, phytoplasma-infected plant and phytoplasma-infected insect. Biological replicates: 6 phytoplasma-infected plants and 6 phytoplasma-infected insects, independently grown and harvested. One replicate per array.

2012-01-16 | E-GEOD-30302 | biostudies-arrayexpress

phytoplasma in plants vs. phytoplasma in insects (co-hybridizations)

Project description:Transcriptional profiling of phytoplasma grown in plant (Chrysanthemum coronarium) and grown in insect (Macrosteles striifrons).

2012-01-16 | GSE30302 | GEO

phytoplasma in plants vs. phytoplasma in insects (single hyb expts)

Project description:Transcriptional profiling of phytoplasma grown in plant (Chrysanthemum coronarium) and grown in insect (Macrosteles striifrons). Two-condition experiment, phytoplasma-infected plant and phytoplasma-infected insect. Biological replicates: 4 phytoplasma-infected plants and 4 phytoplasma-infected insects, independently grown and harvested. One replicate per array.

2012-01-16 | E-GEOD-29274 | biostudies-arrayexpress

phytoplasma in plants vs. phytoplasma in insects (single hyb expts)

Project description:Transcriptional profiling of phytoplasma grown in plant (Chrysanthemum coronarium) and grown in insect (Macrosteles striifrons).

2012-01-16 | GSE29274 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data