Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Viral genomes in Cletus punctiger, Parnara guttata, Sesamia inferens, Cnaphalocrocis medinalis , Chilo suppressalis, Eysarcoris guttigerus, Acrida cinerea, Frankliniella intonsa, Tetragnatha nitens, Argiope bruennichi

ABSTRACT: Viral genomes in Cletus punctiger, Parnara guttata, Sesamia inferens, Cnaphalocrocis medinalis , Chilo suppressalis, Eysarcoris guttigerus, Acrida cinerea, Frankliniella intonsa, Tetragnatha nitens, Argiope bruennichi Transcriptome

PROVIDER: PRJNA628614 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Similar Datasets

Sesamia inferens

Project description:Sesamia inferens overview

| PRJNA70263 | ENA

Viral genomes in Cletus punctiger, Parnara guttata, Sesamia inferens, Cnaphalocrocis medinalis , Chilo suppressalis, Eysarcoris guttigerus, Acrida cinerea, Frankliniella intonsa, Tetragnatha nitens, Argiope bruennichi

Project description:Viral genomes in Cletus punctiger, Parnara guttata, Sesamia inferens, Cnaphalocrocis medinalis , Chilo suppressalis, Eysarcoris guttigerus, Acrida cinerea, Frankliniella intonsa, Tetragnatha nitens, Argiope bruennichi Transcriptome

| PRJNA628133 | ENA

Sesamia inferens

Project description:Sesamia inferens Genome sequencing and assembly

| PRJNA1014234 | ENA

Sesamia inferens

Project description:Sesamia inferens Transcriptome or Gene expression

| PRJNA205103 | ENA

Sesamia inferens

Project description:Sesamia inferens Genome sequencing and assembly

| PRJNA1052298 | ENA

Argiope bruennichi

Project description:Argiope bruennichi overview

| PRJNA881418 | ENA

Frankliniella intonsa

Project description:Frankliniella intonsa overview

| PRJNA207913 | ENA

A chromosome-level genome assembly of Sesamia inferens.

Project description:The pink stem borer, Sesamia inferens (Walker), is a significant polyphagous pest historically restricted to regions south of N34° latitude. However, with changes in global climate and farming practices, the distribution of this moth has progressively exceeded its traditional limit of 34° N and encompassed most regions in North China. The genetic adaptations of S. inferens remain incompletely understood due to the lack of high-quality genome resources. Here, we sequenced the genome of S. inferens using PacBio and Hi-C technology, yielding a genome assembly of 865.04 Mb with contig N50 of 1.23 Mb. BUSCO analysis demonstrated this genome assembly has a high-level completeness of 96.1% gene coverage. In total, 459.72 Mb repeat sequences (53.14% of the assembled genome) and 20858 protein-coding genes were identified. We used the Hi-C technique to anchor 1135 contigs to 31 chromosomes, yielding a chromosome-level genome assembly with a scaffold N50 of 29.99 Mb. In conclusion, our high-quality genome assembly provided valuable resource that exploring the genetic characteristics of local adaptation and developing an efficient control strategy.

| S-EPMC10810861 | biostudies-literature