Project description:We analyzed the epigenetic landscape of five bulk (unsorted) melanoma tumors in a zebrafish melanoma model using ATAC-seq. We find that areas of open chromatin are consistent between tumor samples.
Project description:Single cell derived clones were extracted from four glioblastoma tumors using fluorescence activated cell sorting with CD15 and CD133 markers. Unsorted bulk tumors were also derived. Gene expression analysis of clones of tumor GBM-482 involved comparison between TMZ resistant (n=5) and sensitive (n=2) clones.
Project description:To identify genome-wide, direct targets of HES1 in human pancreas progenitors, we performed Chromatin immunoprecipitation followed by deep sequencing (ChIP-seq) of endogenous HES1 in the HUES4 PDX1GFP/+ reporter cell line on Day 13 of differentiation from both unsorted bulk populations and FACS-sorted GFP+ cells.
Project description:Single cell RNA-seq of the human alveolar rhabdomyosarcoma cell line Rh41. We also inlcude a bulk RNA-seq study of unsorted and sorted cells using CD44 as a marker
2018-04-30 | GSE113660 | GEO
Project description:NW Iberian Freshwater Macroinvertebrate COI Metabarcoding II Water eDNA