Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: TnSeq analysis of Acinetobacter baumannii grown in presence of imipenem

PROVIDER: PRJNA637031 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR11917400.fastq.gz	Fastqsanger.gz
	SRR11917401.fastq.gz	Fastqsanger.gz
	SRR11917402.fastq.gz	Fastqsanger.gz
	SRR11917403.fastq.gz	Fastqsanger.gz
	SRR11917404.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 40

Similar Datasets

Project description:TnSeq analysis of Acinetobacter baumannii in presence of imipenem or sulbactam

| PRJNA636211 | ENA

Project description:TnSeq analysis of Acinetobacter baumannii in presence of polymxin

| PRJNA638415 | ENA

Project description:TnSeq analysis of Acinetobacter baumannii in presence of sulbactam

| PRJNA638887 | ENA

Acinetobacter baumannii 17978 growth temperature proteomics analysis

Project description:Proteomic analysis of Acinetobacter baumannii grown at two different incubation temperatures

2017-10-25 | MSV000081647 | MassIVE

Comparative phosphoproteomics reveals the role of AmpC β-lactamase phosphorylation in the clinical imipenem-resistant strain Acinetobacter baumannii SK17 (MaxQuant 1.3 and 1.4)

Project description:Nosocomial outbreaks of infections caused by multidrug-resistant Acinetobacter baumannii have emerged as a serious threat to human health. The phosphoproteomics of pathogenic bacteria have been investigated for their role in virulence regulation networks. In this study, we analyzed the phosphoproteomics of two clinical isolates of A. baumannii: imipenem-sensitive strain SK17-S and -resistant strain SK17-R.

2015-10-27 | PXD002033 | Pride

Project description:TnSeq analysis of Acinetobacter baumannii in presence of rifampicin or Tobramycin

| PRJNA639060 | ENA

Combined analysis of genome-wide DNA methylome and transcriptome reveals the first epigenetic-based antibiotic-resistance mechanism in Acinetobacter baumannii

Project description:Using Nanopore sequencing, our study has revealed a close correlation between genomic methylation levels and antibiotic resistance rates in Acinetobacter Baumannii. Specifically, the combined genome-wide DNA methylome and transcriptome analysis revealed the first epigenetic-based antibiotic-resistance mechanism in A. baumannii. Our findings suggest that the precise location of methylation sites along the chromosome could provide new diagnostic markers and drug targets to improve the management of multidrug-resistant A. baumannii infections.

2023-09-01 | E-MTAB-13272 | biostudies-arrayexpress

Transcriptional analysis of transposon mutants disrupted in glutathione biosynthesis in Acinetobacter baumannii

Project description:In this study we compare logrithmically grown Acinetobacter baumannii wildtype to a transposon mutant that is disrupted in gshA, the first step in glutathione biosynthesis using RNASeq to identify novel pathways where glutathione may be involved.

2022-01-08 | GSE192957 | GEO

native Tn-seq analysis of ISAba13 in Acinetobacter baumannii AB5075

Project description:The experiment contains native Tn-seq data for Acinetobacter baumannii strain AB5075 with different genetic alterations. The strain was grown at 37 degrees in LB medium and genomic DNA was isolated. We then used PCR to select for DNA regions containing a junction between ISAba13 and chromosomal DNA. Libraries were then prepared using these DNA fragments.

2024-07-15 | E-MTAB-13792 | biostudies-arrayexpress

Project description:TnSeq analysis of Acinetobacter baumannii in presence of levofloxacin or Sulfamethoxazole/trimethoprim

| PRJNA638316 | ENA