Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Microbial community from Gorda Ridge Hydrothermal vent field

ABSTRACT: Microbial community from Gorda Ridge Hydrothermal vent field Raw sequence reads 2019

PROVIDER: PRJNA637089 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR12091900_1.fastq.gz	Fastqsanger.gz
	SRR12091900_2.fastq.gz	Fastqsanger.gz
	SRR12091901_1.fastq.gz	Fastqsanger.gz
	SRR12091901_2.fastq.gz	Fastqsanger.gz
	SRR12091902_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 122

Similar Datasets

Hydrothermal vent metagenome - AEGIR hydrothermal vent field - GS20-ROV9-BS1

Project description:Hydrothermal vent metagenome - AEGIR hydrothermal vent field - GS20-ROV9-BS1 Metagenomic assembly

| PRJNA881934 | ENA

Metaproteome analysis of hydrothermal vent chimney biofilms

Project description:At hydrothermal vent sites, chimneys consisting of sulfides, sulfates, and oxides are formed upon contact of reduced hydrothermal fluids with oxygenated seawater. The walls and surfaces of these chimneys are an important habitat for vent-associated microorganisms. We used community proteogenomics to investigate and compare the composition and in situ protein expression of microbial communities colonizing two actively venting hydrothermal chimneys from the Manus Basin back-arc spreading center (Papua New Guinea).

2018-04-27 | PXD009105 | Pride

hydrothermal vent metagenome

Project description:Hydrothermal vent fields at East Scotia Ridge, Antarctica

| PRJNA237774 | ENA

Co-expression analysis reveals distinct alliances around two carbon fixation pathways in hydrothermal vent symbionts

Project description:Biological carbon fixation is foundational to the biosphere. Most autotrophs are thought to possess one carbon fixation pathway. The hydrothermal vent tubeworm Riftia pachyptila’s chemoautotrophic symbionts, however, possess two functional pathways: the Calvin Benson-Bassham (CBB) and the reductive tricarboxylic acid (rTCA) cycles. Little is known about how Riftia’s symbionts and related organisms coordinate the functioning of these two pathways. Here we investigated net carbon fixation rates, transcriptional/metabolic responses, and transcriptional co-expression patterns of Riftia pachyptila’s endosymbionts by incubating tubeworms at environmental pressures, temperature, and geochemistry. Results showed that rTCA and CBB transcriptional patterns varied in response to different geochemical regimes and that each pathway is allied to specific metabolic processes, suggesting distinctive yet complementary roles in metabolic function. Net carbon fixation rates were also exemplary, and accordingly we propose that co-activity of CBB and rTCA may be an adaptation for maintaining high carbon fixation rates, conferring a fitness advantage in dynamic vent environments.

2024-03-28 | GSE249345 | GEO

hydrothermal vent metagenome

Project description:Juan de Fuca Ridge hydrothermal vent uncultured phage metagenome

| PRJNA47471 | ENA

Hydrothermal Vent Campylobacteria Proteome in Response to N2O

Project description:A culture of the hydrothermal vent bacterium Nitrosophilus labii HRV44T was grown with N2O to investigate molecular mechanisms of N2O-based respiration. Limited sample sizes were collected at 0 hours (before N2O addition to the culture headspace) and at 3, 6, and 24 hours after N2O addition.

2024-10-06 | PXD053214 | Pride

Microbial diversity study from Luso hydrothermal vent field

Project description:Microbial diversity study from hydrothermal bulk wall chimney retrieved from Luso hydrothermal vent field.

| PRJEB31776 | ENA

hydrothermal vent metagenome

Project description:hydrothermal vent metagenome

| PRJNA296714 | ENA

hydrothermal vent metagenome

Project description:Hydrothermal chimney microbial communities from Main Endeavour vent field at the Juan de Fuca Ridge, Pacific Ocean - Hulk metagenome

| PRJNA518420 | ENA

hydrothermal vent metagenome

Project description:Microbial diversity at Hulk Vent in Juan de Fuca Ridge hydrothermal system

| PRJNA246301 | ENA