Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Bartonella alsatica strain:CIP 105477

ABSTRACT: Bartonella alsatica strain:CIP 105477 Genome sequencing

PROVIDER: PRJNA641327 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	SRR12089752_subreads.fastq.gz	Fastqsanger.gz
	SRR12089753_subreads.fastq.gz	Fastqsanger.gz
	SRR12089754_subreads.fastq.gz	Fastqsanger.gz

Items per page:

1 - 4 of 4

Similar Datasets

Comparative genomic hybridization of Bartonella koehlerae and Bartonella quintana with Bartonella henselae

Project description:Comparative genome hybridizations (CGH) of Bartonella koehlerae and Bartonella quintana to a Bartonella henselae microarray.

2005-07-01 | E-MEXP-331 | biostudies-arrayexpress

Bartonella quintana: growth phase and temperature response

Project description:Transcriptional profiling of Bartonella quintana grown on a plate at 28C and 37C for various time points.

2012-12-05 | GSE42685 | GEO

p/CIP gene regulation in mouse embryonic stem cells

2013-08-21 | GSE50017 | GEO

CIP, a cardioprotective factor, inhibits the transition from cardiac hypertrophy to heart failure

Project description:Heart failure is characterized by the inability of the heart to pump effectively and generate proper blood circulation to meet the body's needs; it is a devastating condition that affects more than 100 million people globally. In spite of this, little is known about the mechanisms regulating the transition from cardiac hypertrophy to heart failure. Previously, we identified a cardiomyocyte-enriched gene, CIP, which regulates cardiac homeostasis under pathological stimulation. Here, we show that the cardiac transcriptional factor GATA4 binds the promotor of CIP gene and regulates its expression. We further determined that both CIP mRNA and protein decrease in diseased human hearts. In a mouse model, induced cardiac-specific overexpression of CIP after the establishment of cardiac hypertrophy protects the heart by inhibiting disease progression toward heart failure. Transcriptome analyses revealed that the IGF, mTORC2 and TGFβ signaling pathways mediate the inhibitory function of CIP on pathologic cardiac remodeling. Our study demonstrates GATA4 as an upstream regulator of CIP gene expression in cardiomyocytes, as well as the clinical significance of CIP expression in human heart disease. More importantly, our investigation suggests CIP is a key regulator of the transition from cardiac hypertrophy to heart failure. The ability of CIP to intervene in the onset of heart failure suggests a novel therapeutic avenue of investigation forthe prevention of heart disease progression.

2022-03-05 | GSE194149 | GEO

Bartonella apis strain:P0282

Project description:Bartonella apis strain:P0282 Genome sequencing

| PRJNA596044 | ENA

Complete Genome Sequence of Bartonella alsatica Strain IBS 382 (CIP 105477).

Project description:Bartonella alsatica causes bacteremia in rabbits and, rarely, human infections. Here, we announce the complete and closed genome of B. alsatica IBS 382 (CIP 105477), generated by long-read Pacific Biosciences single-molecule real-time (SMRT) sequencing. The availability of this genome sequence allows future work on understanding the zoonotic potential of this pathogen.

| S-EPMC7441241 | biostudies-literature

Truepera radiovictrix strain:CIP 108686

Project description:Truepera radiovictrix strain:CIP 108686 Genome sequencing

| PRJNA1009452 | ENA

Borreliella garinii strain:CIP 103362

Project description:Borreliella garinii strain:CIP 103362 Genome sequencing

| PRJNA1132127 | ENA

p/CIP gene regulation in mouse embryonic stem cells

Project description:p/CIP binds to many nuclear receptors and plays a major role in hormone dependent transcription of genes. Recently, p/CIP was shown to affect mouse stem cell pluripotency. Microarray gene expression analysis was conducted to assess the role of p/CIP in mouse embryonic stem cells. p/CIP was downregulated using two different siRNAs and total RNA was extracted and hybridized to a microarray. As control, wild type cells were transfected with pooled non specific siRNAs. The expression difference was calculated between the control wild-type cells and cells having p/CIP downregulation. The experiments were carried out at London Regional Genomic Centre (http://www.lrgc.ca/).

2013-08-21 | E-GEOD-50017 | biostudies-arrayexpress

Bartonella sp.

Project description:Bartonella Genome Sequencing

| PRJNA73889 | ENA