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Haloferax gibbonsii strain:LR2-5

ABSTRACT: Genome sequence of Haloferax gibbonsii LR2-5, the host of euryarchaeal virus HFTV1

PROVIDER: PRJNA656928 | ENA |

REPOSITORIES: ENA

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Dataset's files

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			Action	DRS
		Other
	SRR12727020_subreads.fastq.gz	Fastqsanger.gz
	SRR12727021_1.fastq.gz	Fastqsanger.gz
	SRR12727021_2.fastq.gz	Fastqsanger.gz

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2012-04-19 | E-GEOD-37420 | biostudies-arrayexpress

Genes differentially expressed Haloferax mediterranei strains: control wild-type strain vs M-NM-^TphaEC strain

Project description:Transcriptional profiling of Haloferax mediterranei comparing control wild-type strain with M-NM-^TphaEC strain, in which PHA synthase genes are knockouted. M-NM-^TphaEC strain is deficient in PHBV accumulation. Goal was to explore the PHBV biosynthetic pathway and to determine their impact on primary metabolism in H. mediterranei. Total RNA from the control Haloferax mediterranei and its M-NM-^TphaEC strain were used to generate target cDNA, and then hybridized to 8*15K Haloferax mediterranei genome array genechips, representing about 3800 genes.

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Genes differentially expressed Haloferax mediterranei strains: control wild-type strain vs ΔphaA1 strain

Project description:Transcriptional profiling of Haloferax mediterranei comparing control wild-type strain with ΔphaA1 strain, in which phaA1 gene are knockouted. ΔphaA1 strain can accumulate PHB only. Goal was to explore the PHA biosynthetic pathway and to determine their impact on primary metabolism in H. mediterranei.

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Genes differentially expressed Haloferax mediterranei strains: control wild-type strain vs ΔphaEC strain

Project description:Transcriptional profiling of Haloferax mediterranei comparing control wild-type strain with ΔphaEC strain, in which PHA synthase genes are knockouted. ΔphaEC strain is deficient in PHBV accumulation. Goal was to explore the PHBV biosynthetic pathway and to determine their impact on primary metabolism in H. mediterranei.

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