Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Transcriptional responses in developing bark necroses in Fraxinus excelsior after inoculation with Hymenoscyphus fraxineus

PROVIDER: PRJNA663171 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR12630668_1.fastq.gz	Fastqsanger.gz
	SRR12630668_2.fastq.gz	Fastqsanger.gz
	SRR12630669_1.fastq.gz	Fastqsanger.gz
	SRR12630669_2.fastq.gz	Fastqsanger.gz
	SRR12630670_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 52

Similar Datasets

Fraxinus excelsior and F. mandshurica transcriptional response to Hymenoscyphus fraxineus

Project description:Fraxinus excelsior and Fraxinus mandshurica transcriptional response to infection by Hymenoscyphus fraxineus

| PRJEB14977 | ENA

Project description:Transcriptional responses in developing bark necroses in greenhouse-grown Fraxinus excelsior

| PRJNA663173 | ENA

Metabolomic profiling of Fraxinus excelsior genotypes tolerant or susceptible to ash dieback disease reveals changes in iridoid glycosides

Project description:European common ash, Fraxinus excelsior L., is currently threatened by Ash dieback (ADB) caused by the fungus, Hymenoscyphus fraxineus. To detect and identify metabolites that may be products of pathways important in contributing to resistance against H. fraxineus we performed untargeted metabolomic profiling on leaves from selected F. excelsior individuals showing strong tolerance or susceptibility to H. fraxineus. We identified sets of "features" [small molecules] that enabled strong discrimination between tolerant or susceptible genotypes of F. excelsior. Strikingly, tolerant F. excelsior lines exhibited low levels of iridoid glycosides, known anti-feeding deterrents. As Europe is threatened by Emerald Ash Borer (Agrilus planipennis), an invasive wood boring beetle native to East Asia that has devastated North American ash, our study raises the question whether selection for resistance to H. fraxineus leads to ecological trade-offs that result in susceptibility to emerging pests such as emerald ash borer.

2016-11-09 | MTBLS372 | MetaboLights

Project description:Hymenoscyphus albidus on leaflets of Fraxinus excelsior

| PRJNA808236 | ENA

Hymenoscyphus fraxineus

Project description:Hymenoscyphus fraxineus overview

| PRJNA260320 | ENA

MetaboLights MTBLS372 - GNPS Metabolomic profiling of Fraxinus excelsior genotypes tolerant or susceptible to ash dieback disease reveals changes in iridoid glycosides

Project description:This data set is downloaded from MetaboLights (http://www.ebi.ac.uk/metabolights/) accession number MTBLS372 Abstract:European common ash, Fraxinus excelsior L., is currently threatened by Ash dieback (ADB) caused by the fungus, Hymenoscyphus fraxineus. To detect and identify metabolites that may be products of pathways important in contributing to resistance against H. fraxineus we performed untargeted metabolomic profiling on leaves from selected F. excelsior individuals showing strong tolerance or susceptibility to H. fraxineus. We identified sets of “features” [small molecules] that enabled strong discrimination between tolerant or susceptible genotypes of F. excelsior. Strikingly, tolerant F. excelsior lines exhibited low levels of iridoid glycosides, known anti-feeding deterrents. As Europe is threatened by Emerald Ash Borer (Agrilus planipennis), an invasive wood boring beetle native to East Asia that has devastated North American ash, our study raises the question whether selection for resistance to H. fraxineus leads to ecological trade-offs that result in susceptibility to emerging pests such as emerald ash borer.

2017-04-17 | MSV000080960 | GNPS

Hymenoscyphus fraxineus genome assembly

Project description:Hymenoscyphus fraxineus genome assembly

| PRJEB21027 | ENA

Project description:Fraxinus excelsior GWAS

| PRJNA1055085 | ENA

daFraExce

Project description:Fraxinus excelsior (European ash)

| PRJEB81013 | ENA

Project description:Mycobiome of Fraxinus excelsior

| PRJNA611938 | ENA