Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Oral Microbiome Data of Oral Squamous Cell Carcinoma

PROVIDER: PRJNA666891 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR12759013_1.fastq.gz	Fastqsanger.gz
	SRR12759013_2.fastq.gz	Fastqsanger.gz
	SRR12759014_1.fastq.gz	Fastqsanger.gz
	SRR12759014_2.fastq.gz	Fastqsanger.gz
	SRR12759015_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 140

Similar Datasets

Project description:oral microbiome of oral squamous cell carcinoma patients

| PRJNA735337 | ENA

Identification of CMTM6 as a novel mediator of cisplatin resistance in oral squamous cell carcinoma

Project description:Identification of CMTM6 as a novel mediator of cisplatin resistance in oral squamous cell carcinoma

2020-01-07 | MSV000084761 | MassIVE

Gene expression profiles in human oral squamous cell carcinoma tissues and cell lines

Project description:Common overexpressing genes were identified in all human oral squamous cell carcinoma tissues and/or cultured cells. Ten oral squamous cell carcinoma tissues and 10 human oral squamous cell carcinoma cell lines were analyzed. Three normal oral mucosa tissues and a human non-neoplastic keratinocyte cell lines were used as control samples.

2012-09-30 | E-GEOD-36090 | biostudies-arrayexpress

Gene expression analysis of head and neck squamous cell carcinoma cell lines and a control normal oral epithelial cell line

Project description:Microarrays were used to examine gene expression differences between human head and neck squamous cell carcinoma cell lines (FaDu, UTSCC8, UTSCC42a) grown in culture in comparison to a normal oral epithelial cell line. Gene expression data was integrated with global protein expression of head and neck squamous cell carcinoma cell lines and conditioned media to identify secreted protein markers up-regulated at the mRNA level in cancer cells versus the normal cell line. Total RNA obtained from head and neck squamous cell carcinoma cell lines and a normal oral epithelial cell line

2012-08-28 | E-GEOD-40185 | biostudies-arrayexpress

Predictive Value of MicroRNAs in the Progression of Oral Leukoplakias

Project description:Predictive Value of MicroRNAs in the Progression of Oral Leukoplakias Comparison of 10 samples from non-progressive leukoplakias (did not turn into oral squamous cell carcinoma), with 10 samples from progressive leukoplakias (turned into oral squamous cell carcinoma w/in 5 yrs)

2015-02-01 | E-GEOD-62809 | biostudies-arrayexpress

micro-RNA deregulation in cancer-associated fibroblasts in oral squamous cell carcinoma

Project description:micro-RNA in cancer-associated fibroblasts in oral squamous cell carcinoma vs. dysplasia-associated fibroblasts from dysplastic oral lesions vs. normal fibroblasts from normal oral mucosa from healthy individual.

2021-08-27 | GSE172287 | GEO

Genome-wide copy number analysis for occult lymph node metastasis in oral squamous cell carcinoma

Project description:Using Affymetrix Mapping 250K array, we studied copy number aberrations in oral squamous cell carcinoma (OSCC) to identified biomarkers associated with occult lymph node metastasis. We used frozen specimens from 60 OSCC patients. Copy number analysis was performed using homogenized samples of 60 oral squamous cell carcinoma patients by GeneChip Human Mapping 250k Sty arrays. As a reference, SNP array data set of 50 normal Asians (Japanese & Chinese) from HapMap database was used.

2012-09-01 | E-GEOD-31984 | biostudies-arrayexpress

Project description:The oral mouse microbiome promotes tumorigenesis in oral squamous cell carcinoma

| PRJNA549752 | ENA

Expression and SNP array data for oral squamous cell carcinoma

Project description:This SuperSeries is composed of the following subset Series: GSE25099: Expression data from 57 patients with oral cancer and 22 normal persons GSE25103: Affymetrix SNP array data for oral squamous cell carcinoma Refer to individual Series

2011-08-31 | E-GEOD-25104 | biostudies-arrayexpress

Project description:Canine oral squamous cell carcinoma

| PRJEB77007 | ENA