Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Genes related to microtubule functions were downregulated in sinhcaf mutant FG follicles and eggs

ABSTRACT: Genes related to microtubule functions were downregulated in sinhcaf mutant FG follicles and eggs

PROVIDER: PRJNA667863 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR12786064_1.fastq.gz	Fastqsanger.gz
	SRR12786064_2.fastq.gz	Fastqsanger.gz
	SRR12786065_1.fastq.gz	Fastqsanger.gz
	SRR12786065_2.fastq.gz	Fastqsanger.gz
	SRR12786066_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 36

Similar Datasets

Project description:Transcriptome sequencing (RNA-seq) analysis uncovered that 1238 genes were upregulated, 923 genes were downregulated in sinhcaf mutant FG follicles, compared to wild type FG follicles. Loss of sinhcaf in mature eggs resulted in upregulation of 904 genes, and downregulation of 911 genes. Downregulated genes in sinhcaf mutant FG follicles and eggs were classified by gene ontology (GO) analysis, then the top 30 GO terms with highest -log10P values were screened out, and at least two downregulated genes were included in each biological processes, cellular components or molecular function term. Microtubules and microtubule-based processes were included in the top 30 GO terms.

2022-05-10 | GSE159162 | GEO

AD FG

Project description:AD FG Raw sequence reads

| PRJNA1171115 | ENA

MPs FG

Project description:MPs FG Raw sequence reads

| PRJNA1171114 | ENA

mRNA expression signatures of human glioblastoma stem cell like cells after treatment with FG-3019, irradiation and FG-3019 + irradiation

Project description:To investigate effects on mRNA expression through treatment with FG-3019, irradiation and their combination to gain mechanistic hypotheses on the effects of these treatments on glioblastoma stem cell like cells which have been observed in vitro and in vivo. mRNA expression was measured 6 h after treatment with FG-3019, irradiation and their combination. 3 biological replicates were analyzed for each treatment condition (control, FG-3019, irratiation and FG-3019+irradiation)

2014-08-30 | E-GEOD-60921 | biostudies-arrayexpress

Rorc disruption in human FG pancreatic cancer cells

Project description:Rorc disruption in human FG pancreatic cancer cells

2019-02-15 | GSE126537 | GEO

PFG controls gene expression in female gametocytes cooperatively with AP2-FG [PFG_RNA-seq]

Project description:AP2-FG is a female-specific transcription factor (TF) that plays an essential role in female gametocyte development. AP2-FG activates hundreds of genes by binding to a female-specific ten-base cis-acting element. Here, we report that in the rodent malaria parasite Plasmodium berghei, another female-specific TF designated as a partner of AP2-FG (PFG), controls gene expression in female gametocytes cooperatively with AP2-FG.

2024-01-22 | GSE226027 | GEO

PFG controls gene expression in female gametocytes cooperatively with AP2-FG [PFG_ChIP-seq]

2024-01-22 | GSE226021 | GEO

PFG controls gene expression in female gametocytes cooperatively with AP2-FG [AP2-FG_DIP]

2024-01-22 | GSE226020 | GEO

RNA-seq of ovarian follicles in Japanese quail

Project description:In this study, we used RNA-seq to identify differences in gene expression patterns in ovarian follicles of female Japanese quail (Coturnix coturnix japonica) that produce large versus small eggs relative to their body size. A high quality reference genome is currently under construction by the Quail Genome Consortium (BioProject ID: PRJNA292031).

2015-10-11 | E-MTAB-3945 | biostudies-arrayexpress

Unfertilized eggs

Project description:Four separate biological collections of unfertilized eggs laid by wildtype females mated with sterile males, eggs dechorionated and snap-forzen in liquid nitrogen 0-1 hour after egg lay. Set of arrays organized by shared biological context, such as organism, tumors types, processes, etc. Keywords: Logical Set

2005-09-10 | GSE3287 | GEO