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RNA-Seq in Hep3B-shNC and Hep3B-shlnc-CTHCC cells

ABSTRACT: RNA-Seq in Hep3B-shNC and Hep3B-shlnc-CTHCC cells

PROVIDER: PRJNA674827 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR12992463_1.fastq.gz	Fastqsanger.gz
	SRR12992463_2.fastq.gz	Fastqsanger.gz
	SRR12992464_1.fastq.gz	Fastqsanger.gz
	SRR12992464_2.fastq.gz	Fastqsanger.gz
	SRR12992465_1.fastq.gz	Fastqsanger.gz

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RNA-Seq in Hep3B-shNC and Hep3B-shlnc-CTHCC cells

Project description:Total RNA was extracted from Hep3B cells with sh-NC (n = 3) or sh-lnc-CTHCC (n = 3). RNA samples were analyzed by RNA sequencing based on the manufacturer’s protocols. Briefly, Illumina HiSeq 4000 platform was used to sequence the RNA samples for the subsequent generation of raw data. R package was utilized to select genes with significantly differential expression based on fold change ≥2.0 and P≤0.05 between sh-NC and sh-lnc-CTHCC cells. KEGG pathway and GSEA enrichment analysis were used for functional pathway analysis.

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