Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: RNAseq galbut virus infected Drosophila melanogaster

PROVIDER: PRJNA683038 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR13208765.fastq.gz	Fastqsanger.gz
	SRR13208766.fastq.gz	Fastqsanger.gz
	SRR13208767.fastq.gz	Fastqsanger.gz
	SRR13208768.fastq.gz	Fastqsanger.gz
	SRR13208769.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 24

Similar Datasets

Drosophila melanogaster male reproduction system iTraq phosphoproteome

Project description:ITRAQ Phosphoproteomics revealed proteins associated with spermatogenesis in Wolbachia-Infected Male Drosophila Melanogaster

2024-09-29 | PXD026049 | Pride

Project description:Drosophila melanogaster wing disc RNAseq

| PRJNA1185032 | ENA

The transcriptional response of Drosophila melanogaster to infection with the sigma virus (Rhabdoviridae)

Project description:Bacterial and fungal infections induce a potent immune response in Drosophila melanogaster, but it is unclear whether viral infections induce a similar immune response. Using microarrays, we examined the changes in gene expression in Drosophila that occur in response to infection with the sigma virus, a negative-stranded RNA virus (Rhabdoviridae) that occurs in wild populations of D. melanogaster. We detected many changes in gene expression in infected flies, but found no evidence for the activation of the Toll, IMD or Jak-STAT pathways, which control immune responses against other pathogens. We identified a number of functional categories of genes, including serine proteases, ribosomal proteins and chorion proteins that were overrepresented among the differentially expressed genes. We also found that the sigma virus alters the expression of many more genes in males than in females. In contrast to previous results, our data suggest that either Drosophila do not mount an immune response against the sigma virus, or that the immune response is not controlled by known immune pathways. The genes which we identified as differentially expressed after infection are promising candidates for controlling the host’s response to the sigma virus.

2009-09-11 | GSE17377 | GEO

Project description:Drosophila melanogaster infected with Invertebrate iridescent virus 6 (IIV6) Small RNAs deep sequencing

| PRJNA177785 | ENA

RNAseq of 2'3' cGAMP injected Drosophila melanogaster

Project description:RNAseq of 2'3' cGAMP injected Drosophila melanogaster

| PRJNA591568 | ENA

Drosophila melanogaster

Project description:Virus-derived siRNAs produced by Drosophila melanogaster

| PRJNA183973 | ENA

Project description:Small RNA sequencing of Drosophila melanogaster flies and cells infected with IIV-6 virus

| PRJNA768250 | ENA

Wolbachia and virus alter the host transcriptome at the interface of nucleotide metabolism pathways

Project description:Wolbachia is a maternally transmitted bacterium that manipulates arthropod and nematode biology in myriad ways. The Wolbachia strain colonizing Drosophila melanogaster creates sperm-egg incompatibilities and protects its host against RNA viruses, making it a promising tool for vector control. Despite successful trials using Wolbachia-transfected mosquitoes for Dengue control, knowledge of how Wolbachia and viruses jointly affect insect biology remains limited. Using the Drosophila melanogaster model, transcriptomics and gene expression network analyses revealed pathways with altered expression and splicing due to Wolbachia colonization and virus infection. Included are metabolic pathways previously unknown to be important for Wolbachia-host interactions. Additionally, Wolbachia-colonized flies exhibit a dampened transcriptomic response to virus infection, consistent with early blocking of virus replication. Finally, using Drosophila genetics, we show Wolbachia and expression of nucleotide metabolism genes have interactive effects on virus replication. Understanding the mechanisms of pathogen blocking will contribute to the effective development of Wolbachia-mediated vector control programs.

2020-12-05 | GSE162666 | GEO

Transcriptional response of Drosophila S2 cells in response the Drosophila C Virus infection (DCV)

Project description:We infected Drosophila S2 cells (invitrogen) with Drosophila C virus (DCV) (Multiplicity of Infection = 10), and harvested samples for further analysis at 8 and 24 hours post-infection.

2015-06-01 | GSE57434 | GEO

Evaluating Differential Tropism, Pathogenesis, and Antiviral Agents of Hemorrhagic Fever Renal Syndrome and Cardiopulmonary Syndrome Causative Hantaviruses: Andes virus (ANDV), Sin Nombre virus (SNV), and Hantaan virus (HTNV)

Project description:We report RNAseq analysis of control, calu3, astrocytes and cardiomyocytes cells under uninfected (mock) and Andes virus (ANDV), Sin Nombre virus (SNV), Hantaan virus (HTNV) infected and drug (synthetic 6AZA and Favipiravir, herbal Silymarin and Urolithin B) treated conditions

2024-05-16 | GSE232641 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data