Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

The miRNA profile after knockdown of Bmi1 in QBC939 cells

ABSTRACT: The miRNA profile after knockdown of Bmi1 in QBC939 cells

PROVIDER: PRJNA684894 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR13247641.fastq.gz	Fastqsanger.gz
	SRR13247642.fastq.gz	Fastqsanger.gz
	SRR13247643.fastq.gz	Fastqsanger.gz
	SRR13247644.fastq.gz	Fastqsanger.gz
	SRR13247645.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 6

Similar Datasets

The miRNA profile after knockdown of Bmi1 in QBC939 cells

Project description:We profile the expression of miRNAs upon Bmi1 Knockdown in QBC939 cells

2020-12-14 | GSE163094 | GEO

The mRNA profile after knockdown of Bmi1 in QBC939 cells

Project description:We profile the expression of mRNAs upon Bmi1 Knockdown in QBC939 cells

2020-12-15 | GSE163175 | GEO

The mRNA profile after knockdown of Bmi1 in QBC939 cells

Project description:The mRNA profile after knockdown of Bmi1 in QBC939 cells

| PRJNA685145 | ENA

Profile of microRNAs potentially regulated by Bmi1 in Sca1+ Cardiac Protenitor Cells (CPC)

Project description:We compared miRNA expression profiles of B+ and sh-Bmi1 CPCs, looking for miRNAs that show a significant upregulation in B+ CPCs and reduction in sh-Bmi1 CPCs.

2016-12-31 | GSE66813 | GEO

The expression level of microRNA after knockdown of Twist1 or Bmi1

Project description:To screen the microRNA regulated by Twist1 and Bmi1 Establish stable transfectants of pSUPER-sh-Twist1 or pSUPER-sh-Bmi1 in OECM1 cells and analyze the miRNA expression level of by microRNA microarray. OECM1 transfected with pSUPER-sh-scr was used as a control experiment.

2013-02-11 | E-GEOD-29586 | biostudies-arrayexpress

RNA-seq in wild type and Bmi1 knockdown undifferentiated spermatogonia

Project description:Mammalian spermatogenesis is regulated by epigenetic mechanisms that maintain cell type-specific transcriptional programs. The epigenetic regulator BMI1, a PRC1 member, is required for maintaining undifferentiated spermatogonia, but the underlying mechanisms remain unclear. To address this issue, here we performed RNA-sequencing (RNA-seq) analysis in both wild type and Bmi1 knockdown spermatogonia populations.

2023-12-30 | E-MTAB-11777 | biostudies-arrayexpress

Transcriptome profile of ZIP7 knockdown cells

Project description:Transcriptome profile of ZIP7 knockdown cells

| PRJNA649762 | ENA

RNA-seq and ChIP-seq analysis of BMI1 or RING1B-silenced prostate cancer cells C4-2

Project description:Purpose: Study of the role of BMI1 dependent and indpendent of PRC1 in castration-resistant prostate cancer(CRPC) Method: The expression of BMI1 or RING1B was silenced by 2 independent siRNA strands targeted at BMI1 or RING1B in C4-2 cells, scramble RNA as control. mRNA profiles and genome-wide chromatin-state maps were generated by deep sequencing. AR, BMI1 and IgG ChIP was conducted in C4-2 cells. Results: AR-induced genes were significantly down regulated by BMI1 knockdown but not RING1B. higher expression levels of BMI1 activated genes (those downregulated by BMI1 knockdown) were significantly associated with poorer disease-free and poorer overall survival.

2018-02-07 | GSE97831 | GEO

Bmi1 defines long-term adult cardiac stem cells in heart homeostasis and repair

Project description:We have found the existence of a Bmi1+ population in the adult heart contributing to the organ low-rate turnover and repair with the generation of new cardiomyocytes. We show that the Bmi1+ population is a sub-population of the cardiac Sca-1+ progenitor cells. We have analyzed the gene profile by deep-sequencing (RNA-Seq) of Bmi1+ and Sca-1+Bmi1- cells in homeostatic heart condition. On the other hand, we have compared gene profile by deep-sequencing (RNA-Seq) of Bmi1+ cells in homeostatic condition versus Bmi1+ cells 5 days after myocardial infarction (MI). Analysis of RNA-Seq data revealed a differential expression signature between both subsets of cardiac stem/progenitors cells in homeostatic condition and also differences between Bmi1+ cells after AMI versus homeostatic condition.

2017-02-14 | GSE55754 | GEO

Gene expression data from A2780 cells with BMI1 and lncRNA FAL-1 knockdown

Project description:Human ovarian cancer cell line A2780 cells were infected with shRNA targeting lncRNA FAL-1 and proteincoding gene BMI1. We used microarray to identify genes which were co-regulated by lncRNA FAL-1 and BMI1.

2016-11-05 | GSE52210 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data