Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

The mRNA profile after knockdown of Bmi1 in QBC939 cells

ABSTRACT: The mRNA profile after knockdown of Bmi1 in QBC939 cells

PROVIDER: PRJNA685145 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR13252744_1.fastq.gz	Fastqsanger.gz
	SRR13252744_2.fastq.gz	Fastqsanger.gz
	SRR13252745_1.fastq.gz	Fastqsanger.gz
	SRR13252745_2.fastq.gz	Fastqsanger.gz
	SRR13252746_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 12

Similar Datasets

The mRNA profile after knockdown of Bmi1 in QBC939 cells

Project description:We profile the expression of mRNAs upon Bmi1 Knockdown in QBC939 cells

2020-12-15 | GSE163175 | GEO

The miRNA profile after knockdown of Bmi1 in QBC939 cells

Project description:We profile the expression of miRNAs upon Bmi1 Knockdown in QBC939 cells

2020-12-14 | GSE163094 | GEO

The miRNA profile after knockdown of Bmi1 in QBC939 cells

Project description:The miRNA profile after knockdown of Bmi1 in QBC939 cells

| PRJNA684894 | ENA

RNA-seq and ChIP-seq analysis of BMI1 or RING1B-silenced prostate cancer cells C4-2

Project description:Purpose: Study of the role of BMI1 dependent and indpendent of PRC1 in castration-resistant prostate cancer(CRPC) Method: The expression of BMI1 or RING1B was silenced by 2 independent siRNA strands targeted at BMI1 or RING1B in C4-2 cells, scramble RNA as control. mRNA profiles and genome-wide chromatin-state maps were generated by deep sequencing. AR, BMI1 and IgG ChIP was conducted in C4-2 cells. Results: AR-induced genes were significantly down regulated by BMI1 knockdown but not RING1B. higher expression levels of BMI1 activated genes (those downregulated by BMI1 knockdown) were significantly associated with poorer disease-free and poorer overall survival.

2018-02-07 | GSE97831 | GEO

RNA-seq in wild type and Bmi1 knockdown undifferentiated spermatogonia

Project description:Mammalian spermatogenesis is regulated by epigenetic mechanisms that maintain cell type-specific transcriptional programs. The epigenetic regulator BMI1, a PRC1 member, is required for maintaining undifferentiated spermatogonia, but the underlying mechanisms remain unclear. To address this issue, here we performed RNA-sequencing (RNA-seq) analysis in both wild type and Bmi1 knockdown spermatogonia populations.

2023-12-30 | E-MTAB-11777 | biostudies-arrayexpress

Effect of Akirin2 knockdown on the mRNA profile of human HL60 cells

Project description:Effect of Akirin2 knockdown on the mRNA profile of human HL60 cells

| PRJNA666895 | ENA

Transcriptome profile of ZIP7 knockdown cells

Project description:Transcriptome profile of ZIP7 knockdown cells

| PRJNA649762 | ENA

Bmi1 defines long-term adult cardiac stem cells in heart homeostasis and repair

Project description:We have found the existence of a Bmi1+ population in the adult heart contributing to the organ low-rate turnover and repair with the generation of new cardiomyocytes. We show that the Bmi1+ population is a sub-population of the cardiac Sca-1+ progenitor cells. We have analyzed the gene profile by deep-sequencing (RNA-Seq) of Bmi1+ and Sca-1+Bmi1- cells in homeostatic heart condition. On the other hand, we have compared gene profile by deep-sequencing (RNA-Seq) of Bmi1+ cells in homeostatic condition versus Bmi1+ cells 5 days after myocardial infarction (MI). Analysis of RNA-Seq data revealed a differential expression signature between both subsets of cardiac stem/progenitors cells in homeostatic condition and also differences between Bmi1+ cells after AMI versus homeostatic condition.

2017-02-14 | GSE55754 | GEO

mRNA-seq of HCT116 USP22 knockdown cells

Project description:mRNA-seq of HCT116 USP22 knockdown cells

| PRJEB29794 | ENA

mRNA-seq of SW837 USP22 knockdown cells

Project description:mRNA-seq of SW837 USP22 knockdown cells

| PRJEB33860 | ENA