Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Target enrichment of UCEs and exons from the Glossy Antshrike Sakesphorus luctuosus

PROVIDER: PRJNA703443 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR13760202_1.fastq.gz	Fastqsanger.gz
	SRR13760202_2.fastq.gz	Fastqsanger.gz
	SRR13760203_1.fastq.gz	Fastqsanger.gz
	SRR13760203_2.fastq.gz	Fastqsanger.gz
	SRR13760204_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 66

Similar Datasets

Project description:Target enrichment of UCEs and exons from hexacorals

| PRJNA601826 | ENA

Project description:target-enrichment of uces and exons from a new genus of soft coral

| PRJNA1035147 | ENA

Project description:Target enrichment sequencing of UCEs from dried NMNH Pocillopora coral specimens

| PRJNA1075782 | ENA

Project description:Target-enrichment of ultra-conserved elements and exons in Chrysogorgia (Octocorallia)

| PRJNA681648 | ENA

Promiscuity of enhancer, coding and non-coding transcription functions in ultraconserved sequence elements

Project description:The manuscript by D. Licastro and colleagues “Promiscuity of enhancer, coding and non-coding transcription functions in ultraconserved sequence elements” presents an overview of experimental and computational approaches employed by the authors to perform a multi-facet characterization of ultraconserved elements (UCEs). The authors present an interesting analysis where they investigate the transcription of UCEs in mouse development at different stages by conductin an microarray experiment. Some of these results are further verified by RT-PCR.

2010-06-16 | GSE19371 | GEO

Sakesphorus canadensis strain:NA

Project description:Sakesphorus canadensis

| PRJNA968529 | ENA

Sakesphorus cristatus strain:NA

Project description:Sakesphorus cristatus

| PRJNA968530 | ENA

Sakesphorus luctuosus strain:NA

Project description:Sakesphorus luctuosus

| PRJNA968531 | ENA

A novel dominant glossy mutation causes suppression of wax biosynthesis pathway and deficiency on cuticular wax in Brassica napus

Project description:The present study reports the genetic and biochemical characterization of a dominant glossy mutant allele (BnaA. GL) in B. napus that results in a glossy phenotype. Results from transmission electron microscopy and scanning electron microscopy revealed the GL mutant exhibits reduced deposition of the cuticle layer, which was confirmed by a cuticular wax analysis. The wax compositional analysis revealed an increase in aldehydes but a severe decrease in alkanes, ketones and secondary alcohols. Genetic mapping narrowed the BnaA. GL gene to the end of A9 chromosome, where a gene homologous to ECERIFERUM1 (CER1) in Arabidopsis locates.<br><br>Then, we conducted a microarray analysis to find the differentially expressed genes between normal phenotype and glossy plants. Two comparisons were performed: wild type parent VS. the GL parent, and the bulked normal phenotype DH lines VS. the bulked glossy DH lines. The DH lines are generated from F1 plants of two parents, and RNA samples from three DH lines were combined to make a bulked sample for each phenotype. <br><br>Although no discernible mutation was apparent in the B. napus gene, this cDNA microarray chip assay revealed coordinated down regulation of genes encoding enzymes of the cuticular wax biosynthetic in the glossy mutant with BnCER1 being one of the most severely suppressed genes.

2013-12-07 | E-MEXP-3989 | biostudies-arrayexpress

Promiscuity of enhancer, coding and non-coding transcription functions in ultraconserved sequence elements

2010-06-16 | E-GEOD-19371 | biostudies-arrayexpress