Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: 2018 1121 PHT miRNA DMSO or NO DMSO normoxia

PROVIDER: PRJNA704393 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR13772138.fastq.gz	Fastqsanger.gz
	SRR13772139.fastq.gz	Fastqsanger.gz
	SRR13772140.fastq.gz	Fastqsanger.gz
	SRR13772141.fastq.gz	Fastqsanger.gz
	SRR13772142.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 12

Similar Datasets

Comparative Analysis of Host Responses Between Sepsis and COVID-19: A Prospective Observational Study of Whole Blood Transcriptome (miRNA-Seq)

Project description:This prospective observational study conducted at Osaka University Graduate School of Medicine aimed to compare host responses in sepsis and COVID-19 patients by analyzing mRNA and miRNA profiles. They included 22 sepsis patients, 35 COVID-19 patients, and 15 healthy subjects. Sepsis was diagnosed using Sepsis-3 criteria, while COVID-19 was confirmed through SARS-CoV-2 RT-PCR testing and chest CT scans for pneumonia assessment. For RNA sequencing, 14,500 mRNAs, 1121 miRNAs, and 2556 miRNA-targeted mRNAs were available for analysis in sepsis patients. Numbers of genes showing upregulated:downregulated gene expression (false discovery rate <0.05, |log2 fold change| >1.5) were 256:2887 for mRNA, 53:5 for miRNA, and 49:2507 for miRNA-targeted mRNA. Similarly, in COVID-19 patients, 14,500 mRNAs, 1121 miRNAs, and 327 miRNA-targeted mRNAs were analyzed, with numbers of genes exhibiting upregulated:downregulated gene expression of 672:1147 for mRNA, 3:4 for miRNA, and 165:162 for miRNA-targeted mRNA. Sepsis patients had a greater number of upregulated and downregulated genes and pathways compared to COVID-19 patients, indicating a dynamic change in gene expression and pathway activation in sepsis.

2024-08-28 | GSE243218 | GEO

Comparative Analysis of Host Responses Between Sepsis and COVID-19: A Prospective Observational Study of Whole Blood Transcriptome (RNA-Seq)

2024-08-28 | GSE243217 | GEO

Project description:Primary human trophoblasts exposed to DMSO in normoxia

| PRJNA674366 | ENA

Comparison of microRNA profiles between Normoxia and Hypoxia

Project description:We used miRNA array to study differential expression of miRNA under hypoxia exposure in cancer cells. Cells cultured under normoxia were used as controls.

2016-10-20 | GSE52743 | GEO

Effect of prolonged exposure to normoxia on miRNA expression of primary mouse chondrocytes

Project description:miRNA profiles of primary mouse chondrocytes exposed to prolonged normoxia, which resulted in accumulation of oxidative stress. The sequencing data were generated by miRNA sequencing, in three biological replicates. This study provides insights into the role of chronic oxidative stress in chondrocytes and helps identification of miRNAs related to OA pathogenesis.

2019-02-17 | GSE126664 | GEO

Stenotrophomonas sp. 1121-B15 isolate:1121-B15

Project description:Stenotrophomonas sp. 1121-B15 isolate:1121-B15 Genome sequencing

| PRJNA560750 | ENA

Global miRNA expression profile in cardiac progenitor cells generated by ISX-9

Project description:We developed a strategy to generate cardiac progenitor cells from human induced pluripotent stem cells using a novel small molecule.miRNA-sequencing results showed different miRNA expression profile among undifferentiated human induced pluripotent stem cells(hiPSCs), DMSO and ISX-9 treated hiPSCs.In comparsion with DMSO treated cells, ISX-9 upregulated several myogenic miRNAs and cardiac hypertrophy related-miRNAs including miR-335, miR-21, miR-30c,miRNA-181a and miR-214.

2017-12-30 | GSE95390 | GEO

Myocardial reparative functions of exosomes from mouse mesenchymal stem cells (MSCs) are enhanced by hypoxia treatment

Project description:To determine whether hypoxia augments the activity of exosomes by modulating miRNAs, we use miRNA array profile to find the differential expression of miRNAs of exosomes in different culture conditions (normoxia, hypoxia, hypoxia supplemented with GW4869 which is an inhibitor of exosomes generation).

2018-01-01 | GSE102912 | GEO

Project description:2016 0614 Primary human trophoblast miRNA normoxia hypoxia

| PRJNA704399 | ENA

Project description:2015 0430 Primary human trophoblast miRNA normoxia hypoxia

| PRJNA704383 | ENA