Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Effects of circALTO on gene expression of 293T cells

ABSTRACT: Effects of circALTO on gene expression of 293T cells

PROVIDER: PRJNA719386 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR14135953_1.fastq.gz	Fastqsanger.gz
	SRR14135953_2.fastq.gz	Fastqsanger.gz
	SRR14135954_1.fastq.gz	Fastqsanger.gz
	SRR14135954_2.fastq.gz	Fastqsanger.gz
	SRR14135955_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 12

Similar Datasets

Effects of circALTO on gene expression of 293T cells

Project description:Purpose: The goal of the study was to determine the potential effects of ALTO expression on the human transcriptome. Method: 293T cells were transfected with circALTO1 or a control plasmid, in triplicate, and mRNA profiles sequenced. Results: mRNA profiles from circALTO1 and control cells were distinct. ALTO expressing cells induced the transcription of multiple genes previoulsy implicated in polyomavirus infections.

2021-05-25 | GSE171397 | GEO

Tumorigenic effects of TLX over-expression in HEK 293T cells

Project description:Tumorigenic effects of TLX over-expression in HEK 293T cells

| PRJNA494849 | ENA

Gene expression profile of 293T cells transfected with DOCK10

Project description:Gene expression profile of 293T cells transfected with DOCK10

| PRJNA470615 | ENA

Effects of Exportin5 (Exp5) knockdown on microRNA (miRNA) expression in human 293T cells

Project description:Effects of Exportin5 (Exp5) knockdown on microRNA (miRNA) expression in human 293T cells

| PRJNA728078 | ENA

Gene expression profile of 293T cells transfected with DOCK10

Project description:The goal of this study was to identify changes in the gene expression profile (GEP) of 293T cells in response to transfection with DOCK10 during 24 hours.

2019-04-11 | GSE114226 | GEO

Gene Expression Profile of 293T and 293T-Aire-expressing cells

2010-10-16 | GSE24733 | GEO

Homo sapiens strain:293T cells

Project description:Homo sapiens strain:293T cells Transcriptome or Gene expression

| PRJNA218550 | ENA

Effects of circ5533 over-expression in HEK 293T cells

Project description:Transcriptomic analysis of the effect of circ5533 over-expression in HEK 293T cells

| PRJEB48643 | ENA

RNA-seq analysis of miR-210 KO 293T cells

Project description:To study the effects of miR--210 on 293T cells and hypoxia response, we used the CRISPR/Cas9 system to knockout (KO) the human miR-210 gene in 293T cells. We then added DMOG to mimic hypoxia condition and analyzed the RNA expression profile of wildtype (WT) and KO cells under normal and hypoxic conditions. DMOG treatment and RNA-seq were performed three times (experiment 1, 2, and 3).

2024-12-31 | GSE243063 | GEO

Gene Expression Profile of 293T and 293T-Aire-expressing cells

Project description:To analyze the impact of Aire on gene expression profile in a model cell line, we used 293T cells and transfected them either with an Aire expression plasmid pCMV-Aire (where mAire is driven by CMV promoter) or with a control plasmid pCMV2B. Total RNA was extracted 48 hours post transfection, processed and used for gene expression profiling by Affymetrix. The data demonstrate that Aire has a very broad impact, effecting (upregulating and downregulating) hundreds of differents genes, however these genes differ dramatically from its targets in medullary epithelial cells. Keywords: transfection 293T cells were seeded on 10cm plates and were grown in DMEM containing 10% FBS under standard TC conditions. Next day, the cells were transfected either by pCMV-Aire (6ug/plate) or empty pCMV (6ug/plate) using Mirus reagent, according to manufacturer's instructions. Total RNA was extracted 48 hrs post transfection by Trizol protocol according to the manufacturer's instructions. 3 biological replicates were used for Aire transfection and 2 replicates for transfection with a control plasmid.

2010-10-16 | E-GEOD-24733 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data