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Jaculus jaculus

ABSTRACT: The lesser Egyptian jerboa is a small rodent adapted to desert and semi-arid habitats

PROVIDER: PRJNA72689 | ENA |

REPOSITORIES: ENA

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			Action	DRS
		Other
	SRR23498987_1.fastq.gz	Fastqsanger.gz
	SRR23498987_2.fastq.gz	Fastqsanger.gz
	SRR23498988_1.fastq.gz	Fastqsanger.gz
	SRR23498988_2.fastq.gz	Fastqsanger.gz

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Gene expression differences associated with intrinsic hindfoot muscle loss in the jerboa, Jaculus jaculus

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Project description:Jaculus jaculus (Lesser Egyptian jerboa) genome, mJacJac1, maternal haplotype

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Renal transcriptome of the desert adapted Jaculus jaculus during water restriction and rehydration

Project description:Jaculus jaculus were split into three experimental groups: control (water access ad libitum), dehydrated (11 days water restriction), and rehydrated (7 days water restriction followed by 3 days water ad libitum). Kidney samples were extracted and sequenced to investigate changes in gene expression during osmotic challenge in a desert adapted model.

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Project description:The transcriptome signature of peripheral blood mononuclear cells (PBMCs) of Ladakhi cattle adapted to high altitude vis a vis Sahiwal cattle adapted to the arid/semi-arid region at mean sea level was established using bovine expression microarray chips. The transcriptome analysis of PBMCs from these cattle types living at two distinct altitudes, resulted in identification of several hundred differentially expressed genes, biological processes, molecular functions and pathways.

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Project description:Biological soil crusts (BSCs) are cyanobacteria-dominated microbial communities that cover extensive portions of the world’s arid and semi-arid deserts. The infrequent periods of hydration are often too short to allow for dormancy strategies based on sporulation; consequently, survival is based on the unique capabilities of vegetative cells to resuscitate from and re-enter a stress resistant dormant state, one of which is migration within the crust layers in response to hydration. In this study, we sought to characterize the events that govern the emergence of the dominant cyanobacterium from dormancy, its subsequent growth, and the events triggered by re-desiccation and a transition back to dormant state. We performed a 48 hour laboratory wetting experiment of a desert BSC and tracked the response of Microcoleus vaginatus using a whole genome transcriptional time-course including night/day periods. This allowed the identification of genes with a diel expression pattern, genes involved uniquely in the signaling after hydration and those that contribute primarily to desiccation preparation. Desert BSC samples collected from Moab, UT, were hydrated over a period of 48 hours followed by drying induced by removal of water. At periodic times soil samples were harvested and used for RNA extraction and whole genome expression analysis using an expression array representing genes from two strains of M. vaginatus (PCC 9802 and FGP-2)

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Renal transcriptome of the desert adapted Jaculus jaculus during water restriction and rehydration

Project description:Renal transcriptome of the desert adapted Jaculus jaculus during water restriction and rehydration

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