Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Next Generation Sequencing Facilitates Quantitative Analysis of Wild Type and NELL-1(+/6R) Mouse Hippocampus Transcriptomes

ABSTRACT: Next Generation Sequencing Facilitates Quantitative Analysis of Wild Type and NELL-1(+/6R) Mouse Hippocampus Transcriptomes

PROVIDER: PRJNA749780 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR15251064.fastq.gz	Fastqsanger.gz
	SRR15251065.fastq.gz	Fastqsanger.gz
	SRR15251066.fastq.gz	Fastqsanger.gz
	SRR15251067.fastq.gz	Fastqsanger.gz
	SRR15251068.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 12

Similar Datasets

Next Generation Sequencing Facilitates Quantitative Analysis of Wild Type and NELL-1(+/6R) Mouse Hippocampus Transcriptomes

Project description:The goal of this study is to profile and compare the hippocampus transcriptomes of wild type (WT) and NELL-1(+/6R) mice to gain insight on their neurological function.

2023-12-20 | GSE180856 | GEO

circRNA sequencing facilitates quantitative analysis of CUS mice hippocampus and Control mice hippocampus

Project description:circRNA sequencing facilitates quantitative analysis of CUS mice hippocampus and Control mice hippocampus

| PRJNA558498 | ENA

Next Generation Sequencing Facilitates Quantitative Analysis of hippocampus transcriptomes from WT and miR-301a-/- mice

Project description:Next Generation Sequencing Facilitates Quantitative Analysis of hippocampus transcriptomes from WT and miR-301a-/- mice

| PRJNA800430 | ENA

Next Generation Sequencing Facilitates Quantitative Analysis of Solanum lycopersicum bud and flower Transcriptomes

Project description:Next Generation Sequencing Facilitates Quantitative Analysis of Solanum lycopersicum bud and flower Transcriptomes

2021-02-27 | GSE164382 | GEO

Next-generation Sequencing Facilitates Quantitative Analysis of Wild Type and EED cKO mice Hippocampus Dentate Gyrus Transcriptomes

Project description:Purpose:Quantification differentially expressed genes and find target genes. The goals of this study are to compare Wild Type and EED cKO hippocampus dentate gyrus transcriptome profiling (RNA-seq) to quantitative reverse transcription polymerase chain reaction (qRT–PCR) differentially expressed genes and find target genes Methods: Hippocampus dentate gyrus mRNA profiles of 14-day-old wild-type (WT) and Embryonic Ectoderm Development conditional knockout (EED cKO) mice were generated by deep sequencing, in two biological replicates,using BGISEQ-500 platform.All RNA-Seq data were aligned to mouse genome version mm10 using HISAT.We use cluster software and Euclidean distance matrix for the hierarchical clustering analysis of the expressed gene and sample program at the same time, the clustering results can be viewed with javaTreeview. qRT–PCR validation was performed using SYBR Green assays. Results:Only transcripts that showed more than 2-fold differential expression compared to control were subjected to relevance network analysis. 1047 candidate genes that were differentially expressed with biological functional groups as compared between WT and EED cKO mice . Conclusions: Our study represents the first detailed analysis of Wild Type and EED cKO mice hippocampus dentate gyrus transcriptomes, with two biologic replicates, generated by RNA-seq technology.

2019-05-11 | GSE131035 | GEO

Next Generation Sequencing Facilitates Quantitative Analysis of hippocampus transcriptomes from WT and miR-301a-/- mice

Project description:Purpose: we used next generation sequencing to analyze gene expression profiles of hippocampus from WT and miR-301a-/- mice. The goals of this study are to compare the different gene expression profiles of hippocampus between WT and miR-301a-/- mice.

2022-01-28 | GSE194389 | GEO

Next-generation Sequencing Facilitates Quantitative Analysis of Wild Type and EED cKO mice Hippocampus Dentate Gyrus Transcriptomes

Project description:Next-generation Sequencing Facilitates Quantitative Analysis of Wild Type and EED cKO mice Hippocampus Dentate Gyrus Transcriptomes

| PRJNA542355 | ENA

Next Generation Sequencing Facilitates Quantitative Analysis of CHAA Transcriptomes

Project description:Next Generation Sequencing Facilitates Quantitative Analysis of CHAA Transcriptomes

| PRJNA725272 | ENA

Next Generation Sequencing Facilitates Quantitative Analysis of Retinoblastoma Transcriptomes

Project description:Next Generation Sequencing Facilitates Quantitative Analysis of Retinoblastoma Transcriptomes

| PRJNA436090 | ENA

Next Generation Sequencing Facilitates Quantitative Analysis of IBP Transcriptomes

Project description:Next Generation Sequencing Facilitates Quantitative Analysis of IBP Transcriptomes

| PRJNA761350 | ENA