Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Arbuscular mycorrhizal fungal response to fire in Great Smoky Mountains National Park

PROVIDER: PRJNA771625 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR16470400_1.fastq.gz	Fastqsanger.gz
	SRR16470400_2.fastq.gz	Fastqsanger.gz
	SRR16470401_1.fastq.gz	Fastqsanger.gz
	SRR16470401_2.fastq.gz	Fastqsanger.gz
	SRR16470402_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 118

Similar Datasets

Project description:Pyrophilus fungi in the Great Smoky Mountains National Park

| PRJNA605421 | ENA

Project description:Bacterial and fungal sequencing of soils from across Great Smoky Mountains National Park

| PRJNA1165905 | ENA

Great Smoky Mountains National Park stream shotgun metagenomic data

Project description:Great Smoky Mountains National Park stream shotgun metagenomic data Metagenome

| PRJNA795480 | ENA

Great Smoky Mountains National Park stream metabarcoding data

Project description:Great Smoky Mountains National Park stream metabarcoding data Targeted loci environmental

| PRJNA794147 | ENA

Gene expression during early stages of arbuscular mycorrhizal root formation in Medicago truncatula.

2012-03-28 | GSE34617 | GEO

Great Smoky Mountains National Park Aquatic Invertebrate Genomic Shotgun Libraries

Project description:Shotgun genomic DNA data for multiple aquatic invertebrate taxa in Great Smoky Mountains National Park.

| PRJNA797439 | ENA

Listeria

Project description:Genome sequencing and assembly of Listeria spp. isolated from soil in Great Smoky Mountains National Park

| PRJNA760531 | ENA

Gene expression during early stages of arbuscular mycorrhizal root formation in Medicago truncatula.

Project description:Arbuscular mycorrhiza (AM) interactions between plants and Glomeromycota fungi primarily support phosphate aquisition of most terrestrial plant species. To unravel gene expression during early stages of Medicago truncatula root colonization by AM fungi, we used genome-wide transcriptome profiling based on mycorrhizal root fragments enriched for early fungal infection stages. We used Medicago GeneChips to detail the global programme of gene expression in response to early stages of colonization by arbuscular mycorrhizal fungi and identified genes differentially expressed during these early stages. Medicago truncatula GFP-HDEL hairy roots (genotypes A17 and DMI3) were grown in vertically-oriented petri dishes, incubated at 26M-BM-0C and inoculated with 8 Gigaspora margarita spores, which were positioned between the lateral roots. G.margarita spores germinated in 2 to 4 days. Hyphopodia were observed after 5-6 days. Root fragments which reacted to the fungal contact were collected and frozen. Non-inoculated control root fragments were harvested at a comparable age.

2012-03-27 | E-GEOD-34617 | biostudies-arrayexpress

Project description:Population genomic structure of the salamanders Plethodon jordani and Desmognathus wrighti in Great Smoky Mountains National Park

| PRJNA1062342 | ENA

Gene expression response in roots of Medicago truncatula mutants treated with Myc LCOs

Project description:Legumes interact with soil fungi, leading to the development of arbuscular mycorrhizal (AM) roots. Diffusible AM fungal signals were identified as sulphated and non-sulphated LCOs (sMyc-LCOs and nsMyc-LCOs). Applying Myc-LCOs on roots of symbiotic mutants, we used GeneChips to detail the global programme of gene expression in these mutants in response to the external application of Myc-LCOs.

2012-05-31 | GSE33637 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data