Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Glycine max cultivar:Clark

ABSTRACT: BPMV-VIGS targeting iron related genes in Clark (Glycine max)

PROVIDER: PRJNA777456 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR16938900.fastq.gz	Fastqsanger.gz
	SRR16939000.fastq.gz	Fastqsanger.gz
	SRR16938901.fastq.gz	Fastqsanger.gz
	SRR16939001.fastq.gz	Fastqsanger.gz
	SRR16938902.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 256

Similar Datasets

Glycine max cultivar:Clark

Project description:Glycine max cultivar:Clark Genome sequencing

| PRJNA627639 | ENA

Glycine max cultivar:Clark

Project description:Glycine max cultivar:Clark Transcriptome or Gene expression

| PRJNA318409 | ENA

Expression data of Soybean (Glycine max) roots from different iron treatments.

Project description:Two Near Isogenic soybean (Glycine max) lines were grown in hydroponic conditions with either 50uM ferric nitrate or 100uM ferric nitrate. After 10 days, half the plants were harvested (total root tissue). At 12 days after planting, iron was added to plants grown in low iron conditions bringing them up to sufficient iron growth conditions. Root tissue was harvested for the remaining plants at 14 days after planting. Gene expression analysis from root tissue of two Near Isogenic Lines (NILs), Clark (PI548553) and IsoClark (PI547430), grown in iron stress or iron stress recovered conditions.

2010-09-06 | GSE22227 | GEO

Expression data of Soybean (Glycine max) roots from different iron treatments.

2010-09-06 | E-GEOD-22227 | biostudies-arrayexpress

Glycine max isolate:Clark mutation UC3

Project description:Glycine max isolate:Clark mutation UC3 Genome sequencing

| PRJNA987730 | ENA

Glycine max cultivar:Clark 18a (UC18a)

Project description:Glycine max cultivar:Clark 18a (UC18a) Genome sequencing and assembly

| PRJNA350725 | ENA

Glycine max strain:Clark

Project description:Glycine max Transcriptome or Gene expression

| PRJNA223414 | ENA

Glycine max cultivar:Clark

Project description:Glycine max hairy root Raw sequence reads

| PRJNA604625 | ENA

Epigenomics of Glycine max

Project description:Cytosine methylation is a base modification that is often used by genomes to store information that is stably inherited through mitotic cell divisions. Most cytosine DNA methylation is stable throughout different cell types or by exposure to different environmental conditions in plant genomes. Here, we profile the epigenomes of ~100 Glycine max lines to explore the extent of natural epigenomic variation. We also use these data to determine the extent to which DNA methylation variants are linked to genetic variations.

2018-05-07 | GSE114074 | GEO

CGH: IsoClark vs. Clark

Project description:Soybean near-isogenic lines (NILs) differing in iron deficiency chlorosis (IDC) tolerance were genotyped to determine differential genetic introgressions from the donor line T203 into the Clark background. The CGH comparison reveals T203 loci that are differentially introgressed between the IsoClark sub-lines. Comparison of IsoClark soybean NILs to the recurrent parent Clark; the reported values show the log2 ratio of the normalized IsoClark hybridization signals (Cy3) over the normalized Clark hybridization signal (Cy5)

2013-03-02 | E-GEOD-44789 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data