Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Single-cell RNA-seq analysis of the lungs of Nkx2.1 Cre Lkb1f/f and Lkb1f/f mice

ABSTRACT: Single-cell RNA-seq analysis of the lungs of Nkx2.1 Cre Lkb1f/f and Lkb1f/f mice

PROVIDER: PRJNA793246 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR17383773_1.fastq.gz	Fastqsanger.gz
	SRR17383773_2.fastq.gz	Fastqsanger.gz
	SRR17383774_1.fastq.gz	Fastqsanger.gz
	SRR17383774_2.fastq.gz	Fastqsanger.gz
	SRR17383775_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 16

Similar Datasets

Single-cell RNA-seq analysis of the lungs of Nkx2.1 Cre;Lkb1f/f and Lkb1f/f mice

Project description:To investigate the molecular mechanism of LKB1 in the regulation of lung development, we performed single-cell RNA-seq analysis of the lungs of Nkx2.1 Cre;Lkb1f/f and Lkb1f/f mice. In total, 30,408 lung cells were collected for the scRNA-seq analysis of the whole lung cells isolated from 5-week-old Nkx2.1 Cre;Lkb1f/f or Lkb1f/f mice, when the Nkx2.1 Cre;Lkb1f/f mice began to die.

2024-12-30 | GSE192806 | GEO

Single cell analysis of lung cells from Cd11c-Cre and Cd11c-CreXist flox mice under allergic asthma conditions

Project description:To identify changes in cellular compositions and their transcriptomic expressions in lungs of Cd11c-Cre and Cd11c-CreXist flox mice undergoing allergic asthma environment

2024-05-24 | GSE267830 | GEO

Proteome and phosphoproteome analysis of autophagy deficient ATG5flox:CamKII-Cre and ATG5flox:VGAT-Cre conditional knockout mice

Project description:The experiment was performed to find selective targets of autophagy in different subtypes of neurons. Therefore, brain tissue of conditional knockout mice lacking autophagy protein ATG5 in inhibitory or excitatory neurons was used. Cortices (ATG5flox:CamKII-Cre) / striata (ATG5flox:VGAT-Cre) of mice were mixed with lys6 labeled brain lysates as internal controls between the samples. Samples were measured by LC-MS/MS and resulting H/L ratios were used to quantify proteomic and phosphoproteomic changes.

2022-11-15 | PXD029435 | Pride

Single-cell epigenomic analysis of hypodermal macrophages from Csf1r-cre x Igf1-flox mice.

Project description:To explore the effect of cell-autonomous Igf1 expression on hypodermal macrophages, these cells were isolated from Csf1r-cre x Igf1-flox mice and subjected to single-cell ATAC-sequencing.

2023-09-06 | GSE227859 | GEO

Single-cell RNAseq of the resident immune cells from Gli1HhipCKO_Tam and Gli1HhipCKO_Oil_Control mice lungs

Project description:To study resident immune cells in Hhip-deleted lungs, we conduct single-cell RNAseq of the resident immune cells from Gli1HhipCKO_Tam and Gli1HhipCKO_Oil_Control mice lungs using 10X genomics scRNAseq technique.

2023-02-13 | GSE206721 | GEO

Single-cell RNA-sequencing of intratibial LLC cancer model in DMP1-Cre Mfn2-/- mice, DMP1-Cre Rhot1-/- mice, and wild-type mice.

Project description:Single-cell RNA-sequencing of intratibial LLC cancer model in DMP1-Cre Mfn2-/- mice, DMP1-Cre Rhot1-/- mice, and wild-type mice.

| PRJNA951260 | ENA

ROSA26Foxf1; Tie2-cre lung gene expression analysis.

Project description:Analysis of genes deregulated due to heterozygous overexpression of Foxf1 in endothelial and hematopoietic cells using Tie2-cre in embryonic day 18.5 mouse lungs. Total RNA obtained from three ROSA26Foxf1; Tie2-cre mouse lungs compared to three control ROSA26-lox-stop-lox (LSL) -Foxf1 mouse lungs.

2016-09-01 | E-GEOD-77881 | biostudies-arrayexpress

Single cell RNA-sequencing of lungs of Ifngr1-/-Rag-2-/- mice

Project description:Single cell RNA-sequencing of lungs of Ifngr1-/-Rag-2-/- mice

| PRJNA689574 | ENA

Single-cell RNA-sequencing of bone marrow samples from Fsp1-Cre;Col1a1flox/flox mice and WT mice

Project description:We employed genetic mouse model (Fsp1-Cre;Col1a1flox/flox) to delete Col1a1 (type I collagen) specifically in Fsp1-expressing cells in comparison with control WT mice (Cre-negative;Col1a1flox/flox). Single-cell RNA-sequencing analyses were performed on unfractionated live cell mixtures from bone marrow samples from Fsp1-Cre;Col1a1flox/flox mice and WT mice, to investigate the impact of Fsp1-cell-specific Col1 deletion on bone marrow microenvironment.

2021-09-18 | GSE184360 | GEO

Single cell RNA sequencing of myeloid cells from lungs of young and aged mice

Project description:Single cell RNA sequencing from lungs of young (2-3 month old) and aged (20-22 month old) mice.

2021-10-20 | GSE167236 | GEO