Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

MafB, WDR77, and ß-catenin interact with each other and have similar genome association profiles

ABSTRACT: MafB, WDR77, and ß-catenin interact with each other and have similar genome association profiles

PROVIDER: PRJNA802039 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR17830221_1.fastq.gz	Fastqsanger.gz
	SRR17830221_2.fastq.gz	Fastqsanger.gz
	SRR17830222_1.fastq.gz	Fastqsanger.gz
	SRR17830222_2.fastq.gz	Fastqsanger.gz
	SRR17830223_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 38

Similar Datasets

MafB, WDR77, and ß-catenin interact with each other and have similar genome association profiles [RNA-seq]

Project description:MafB (a bZIP transcription factor), ß-catenin (the ultimate target of the Wnt signal transduction pathway that acts as a transcriptional co-activator of LEF/TCF proteins), and WDR77 (a transcriptional co-activator of multiple hormone receptors) are important for breast cellular transformation. Unexpectedly, these proteins interact directly with each other, and they have similar genomic binding profiles. Furthermore, while some of these common target sites coincide with those bound by LEF/TCF, the majority are located just downstream of transcription initiation sites at a position near paused RNA polymerase (Pol II) and the +1 nucleosome. Occupancy levels of these factors at these promoter-proximal sites are strongly correlated with the level of paused Pol II and transcriptional activity.

2022-02-02 | GSE195739 | GEO

MafB, WDR77, and ß-catenin interact with each other and have similar genome association profiles [ChIP-seq]

2022-02-02 | GSE195737 | GEO

MafB, WDR77, and ß-catenin interact with each other and have similar genome association profiles [RNA-seq]

Project description:MafB, WDR77, and ß-catenin interact with each other and have similar genome association profiles [RNA-seq]

| PRJNA802041 | ENA

MafB, WDR77, and ß-catenin interact with each other and have similar genome association profiles [ChIP-seq]

Project description:MafB, WDR77, and ß-catenin interact with each other and have similar genome association profiles [ChIP-seq]

| PRJNA802042 | ENA

MafB, WDR77, and ß-catenin interact with each other and have similar genome association profiles.

| S-EPMC9049301 | biostudies-literature

MafB, WDR77, and ß-catenin interact with each other and have similar genome association profiles

Project description:This SuperSeries is composed of the SubSeries listed below.

2022-02-02 | GSE195740 | GEO

Contribution of WDR77 and p53 to androgen response in prostate cancer cells

Project description:To decipher the contribution of WDR77 and p53 to androgen-responsive gene expression, effect of siRNA-mediated silencing of WDR77 and p53 on expression of androgen-dependent genes was studied. Human LNCaP prostate cancer cells were transfected with individual siRNA SmartPools targeting WDR77 or p53 or a non-targeting siRNA SmartPool. Forty-two hours after transfection, cells were treated with synthetic androgen R1881 (5nM) or vehicle. Three biological replicates were generated per treatment group. Forty-eight hours later, total RNA was isolated and processed for Illumina oligoarray analysis.

2016-03-01 | E-GEOD-66977 | biostudies-arrayexpress

Contribution of WDR77 and p53 to androgen response in prostate cancer cells

2016-03-01 | GSE66977 | GEO

Transcriptomic Analysis Reveals Co-Regulation by PRMT5 and WDR77 in HSC-5 Cells

Project description:CRISPR was utilized to deplete either PRMT5 or WDR77 in HSC-5 cells. Subsequently, RNA-seq was performed to identify changes in the transcriptome following the loss of PRMT5 or WDR77 in these cells. Critically, Gene Set Enrichment Analysis (GSEA) was conducted to screen and identify a list of genes co-regulated by PRMT5 and WDR77.

2024-09-19 | GSE272319 | GEO

The role of PRMT5/WDR77 complex in promoting breast cancer oncogenesis [RNA-Seq]

Project description:Comprehensive RNA-seq experiments in control and PRMT5 and WDR77 shRNA infected cells delineate the role of PRMT5/WDR77 complex in promoting breast cancer oncogenesis

2017-12-31 | GSE75741 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data