Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Betta splendens

ABSTRACT: Transcriptomic data for different tissues of the Siamese fighting fish

PROVIDER: PRJNA809309 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR18099019_1.fastq.gz	Fastqsanger.gz
	SRR18099019_2.fastq.gz	Fastqsanger.gz
	SRR18099020_1.fastq.gz	Fastqsanger.gz
	SRR18099020_2.fastq.gz	Fastqsanger.gz
	SRR18099021_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 126

Similar Datasets

Betta splendens isolate:SP2018

Project description:Genome sequencing of the siamese fighting fish Betta splendens

| PRJNA592275 | ENA

Betta splendens

Project description:Behavioral and neurotranscriptomic synchronization between the two opponents of a fighting pair of the fish Betta splendens

| PRJDB9261 | ENA

fBetSpl5.2

Project description:Betta splendens (Siamese fighting fish)

| PRJEB30367 | ENA

Betta splendens

Project description:Data of RNA-seq transcriptomes in the brain associated with aggression in males of the fish Betta splendens

| PRJDB11439 | ENA

fBetSpl5

Project description:Betta splendens (Siamese fighting fish) genome assembly, fBetSpl5

| PRJEB30365 | ENA

The genetic architecture of phenotypic diversity in the Betta fish (<i>Betta splendens</i>).

Project description:The Betta fish displays a remarkable variety of phenotypes selected during domestication. However, the genetic basis underlying these traits remains largely unexplored. Here, we report a high-quality genome assembly and resequencing of 727 individuals representing diverse morphotypes of the Betta fish. We show that current breeds have a complex domestication history with extensive introgression with wild species. Using a genome-wide association study, we identify the genetic basis of multiple traits, including coloration patterns, the "Dumbo" phenotype with pectoral fin outgrowth, extraordinary enlargement of body size that we map to a major locus on chromosome 8, the sex determination locus that we map to dmrt1, and the long-fin phenotype that maps to the locus containing kcnj15. We also identify a polygenic signal related to aggression, involving multiple neural system-related genes such as esyt2, apbb2, and pank2. Our study provides a resource for developing the Betta fish as a genetic model for morphological and behavioral research in vertebrates.

| S-EPMC9491723 | biostudies-literature

fBetSpl5.2 alternate haplotype

Project description:Betta splendens (Siamese fighting fish) genome assembly, fBetSpl5.2, alternate haplotype

| PRJEB30366 | ENA

Betta splendens

Project description:Betta splendens whole genome sequencing

| PRJNA778896 | ENA

Betta splendens

Project description:Betta splendens whole genome re-sequencing

| PRJNA689926 | ENA

Betta splendens

Project description:Betta splendens Transcriptome and Gene Expression