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Brassica rapa subsp. chinensis

ABSTRACT: Three Chinese Cabbage parents and their F2 generation Raw sequence reads

PROVIDER: PRJNA817372 | ENA |

REPOSITORIES: ENA

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Dataset's files

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			Action	DRS
	SRR18382658_1.fastq.gz	Fastqsanger.gz
	SRR18382658_2.fastq.gz	Fastqsanger.gz
	SRR18382659_1.fastq.gz	Fastqsanger.gz
	SRR18382659_2.fastq.gz	Fastqsanger.gz
	SRR18382660_1.fastq.gz	Fastqsanger.gz

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Next Generation Sequencing of non-heading Chinese cabbage (Brassica rapa ssp. chinensis)

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Comparative Metabolic Profiling of Green and Purple Pakchoi (Brassica Rapa Subsp. Chinensis).

Project description:Pakchoi (Brassica rapa subsp. chinensis) is cultivated for its nutritional value, particularly with regard to vitamins, minerals and dietary fibers. However, limited metabolic information is available on the phyto-nutritional traits of pakchoi. Our GC-TOF MS analysis showed that green pakchoi has higher contents of carbon metabolism-associated metabolites such as sugars, sugar derivatives and inositol, while purple pakchoi has higher levels of nitrogen metabolism-associated metabolites such as amino acids and amino acid derivatives. To compare the content and composition of secondary metabolites in green and purple pakchoi, we analyzed phenylpropanoid-derived compounds and anthocyanins in mature leaves using an HPLC-UV system. This analysis identified 9 phenylpropanoid-derived compounds and 12 anthocyanins in the mature leaves of green and purple pakchoi. The level of rutin was significantly higher in purple pakchoi compared with green pakchoi, consistent with the expression of phenylpropanoid biosynthetic genes in the two pakchoi cultivars. The data obtained from this comprehensive metabolic profiling would be helpful to improve our understanding of the nutritional values of pakchoi cultivars as food sources.

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