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Effect of trans-vaccenic acid(TVA) treatment on gene expression of mouse CD8+ T cells

ABSTRACT: Effect of trans-vaccenic acid(TVA) treatment on gene expression of mouse CD8+ T cells

PROVIDER: PRJNA837177 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR19167300.fastq.gz	Fastqsanger.gz
	SRR19167301.fastq.gz	Fastqsanger.gz
	SRR19167302.fastq.gz	Fastqsanger.gz
	SRR19167303.fastq.gz	Fastqsanger.gz
	SRR19167304.fastq.gz	Fastqsanger.gz

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Effect of trans-vaccenic acid(TVA) treatment on gene expression of mouse CD8+ T cells

Project description:To investigate the TVA's effect on mouse CD8+ T cells in vitro, we treated activated mouse CD8+ T cells with DMSO or 20 µM TVA for 24 hours. We then performed gene expression profiling analysis using data obtained from RNA-seq.

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Effect of trans-vaccenic acid(TVA) treatment on gene expression of mouse CD8+ T cells

Project description:To investigate the TVA's effect on mouse CD8+ T cells in vitro, we treated activated mouse CD8+ T cells with 20 µM TVA for various timepoints (or untreated cell control) followed by kethoxal labeling of single stranded DNA (ssDNA) We then performed differential analysis of ssDNA levels following the KAS-pipe pipeline

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Effect of trans-vaccenic acid(TVA) treatment on gene expression of mouse CD8+ T cells

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Effect of Creb1 KD on TVA dependent CD8+ T cell activation

Project description:To investigate the role of Creb1 in TVA dependent CD8+ T cell activation, we knocked down Creb1 of mouse CD8+ T cells with siRNAs then treated with DMSO or TVA We then performed gene expression profiling analysis using data obtained from RNA-seq.

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Effect of trans-vaccenic acid(TVA) diet on 16S ribosomal RNA (rRNA) expression of mouse gut microbiome

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