Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Streptomyces sp. Je 1-79

ABSTRACT: Streptomyces sp. Je 1-79 Genome sequencing and assembly

PROVIDER: PRJNA837733 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	SRR19217767.fastq.gz	Fastqsanger.gz

Items per page:

1 - 2 of 2

Similar Datasets

Cellvibrio sp. 79 isolate:79

Project description:Cellvibrio sp. 79 isolate:79 Genome sequencing and assembly

| PRJNA371449 | ENA

Streptomyces sp. Je 1-4

Project description:Streptomyces sp. Lv1-4 Genome sequencing and assembly

| PRJNA883639 | ENA

Streptomyces sp. Je 1-332

Project description:Streptomyces sp. Je 1-332 Genome sequencing

| PRJNA1130432 | ENA

Streptomyces sp. Je 1-369

Project description:Streptomyces sp. Je 1-369 Genome sequencing

| PRJNA860344 | ENA

Streptomyces sp. Je 1-4 4N24_ara

Project description:Streptomyces sp. Lv1-4 4N24_ara Genome sequencing and assembly

| PRJNA898894 | ENA

Streptomyces sp. Je 1-4 4N24

Project description:Streptomyces sp. Lv1-4 4N24 Genome sequencing and assembly

| PRJNA896761 | ENA

Streptomyces sp. M7 LC-MS - Streptomyces sp. M7 has demonstrated ability to remove lindane from culture media and soils

Project description:Streptomyces sp. M7 has demonstrated ability to remove lindane from culture media and soils. In this study, we used MS-based label-free quantitative proteomic to understand lindane degradation and its metabolic context in Streptomyces sp. M7. We identified the proteins involved in the up-stream degradation pathway. Our results demonstrated that mineralization of lindane is feasible since proteins from an unusual down-stream degradation pathway were also identified. Degradative steps were supported by an active catabolism that supplied energy and reducing equivalents in the form of NADPH. This is the first study in which degradation steps of an organochlorine compound and metabolic context are elucidate in a biotechnological genus as Streptomyces. These results serve as basement to study other degradative actinobacteria and to improve the degradation processes of Streptomyces sp. M7.

2018-08-10 | PXD010607 | Pride

Examination of polyester-polyurethane degradation by Streptomyces sp. PU10

Project description:This study aimed to investigate the variations in the protein composition of Streptomyces sp. PU10 when cultivated with either Impranil (polyestere-polyurethane) or glucose as the carbon source. We analyzed both the intracellular and extracellular protein fractions to gain insights into the intricate processes involving PU degradation, intermediate metabolic pathways in PU degradation, and the connection between primary and secondary metabolism within Streptomyces sp. PU10.

2024-03-29 | PXD047534 | Pride

Proteomics analysis of streptomyces sp. MBT76 demonstrates the production of qinichelins, new mixed catecholate-hydroxamate siderophores

Project description:Actinomycete genomes contain a plethora of orphan gene clusters encoding unknown secondary metabolites, and representing a huge unexploited pool of chemical diversity. The explosive increase in genome sequencing and the massive advance of bioinformatic tools have revolutionized the rationale for natural product discovery from actinomycetes. In this context, we applied a genome mining approach to discover a group of unique catecholate-hydroxamate siderophores termed as qinichelins from Streptomyces sp. MBT76. Quantitative proteomics statistically correlated a gene cluster of interest (qch) to its unknown chemotype (qinichelin), after which structural elucidation of isolated qinichelin was assisted by bioinformatics analysis and verified by MS2 and NMR experiments. Strikingly, intertwined functional crosstalk among four separately located gene clusters was implicated in the biosynthesis of qinichelins.

2018-10-24 | PXD006577 | Pride

Chelativorans sp. AA-79

Project description:Chelativorans sp. AA-79 Genome sequencing

| PRJNA935532 | ENA