Project description:To investigate the role of ACOX1, we knocked down ACOX1 by shRNA in HK-2 cell lines and detected differential genes. We then performed gene expression profiling analysis using data obtained from RNA-seq of 2 different cells.
Project description:We first performed miRNA analysis on SU-4 cells in suspension, and after 24 and 48 h of HK co-culture. To ensure that no HK cell contamination occurred, SU-4 cells in suspension and after co-culture were purified by CD19-positive magnetic selection, followed by total RNA isolation. Two-condition experiment, S4 vs. S4+HK cells. Biological replicates: 2 suspension controls, 2 co-cultured with HK cells, independently grown and harvested. One replicate per array.