Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Arabidopsis thaliana cultivar:Columbia-0

ABSTRACT: Arabidopsis thaliana transcriptome following antimycin A or myxothiazol treatment in the light and dark

PROVIDER: PRJNA843852 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Similar Datasets

Arabidopsis thaliana cultivar:Columbia-0

Project description:Arabidopsis thaliana transcriptome for roots and shoots, following antimycin A or myxothiazol treatment in the light and dark

| PRJNA894307 | ENA

Molecular characterization of the submergence response of Arabidopsis thaliana ecotype Columbia

Project description:This study profiles transcriptomic changes of Arabidopsis thaliana Col-0 in response to submergence. This dataset includes CEL files, RMA signal values and MAS5 P/M/A calls from total mRNA populations of plants at 9 to 10 leaf rosette stage. Biological replicates of root and shoot tissues were harvested after 7 h and 24 h of submergence in darkness along with corresponding non-submerged dark controls. To characterize the dark response, non-submerged light controls plants were harvested at the 0 h time point. Quantitative profiling of cellular mRNAs was accomplished with the Affymetrix ATH1 platform. Changes in the transcriptome in response to submergence and early darkness were evaluated, and the data led to identification of genes co-regulated at the conditional and organ-specific level.

2010-11-12 | GSE24077 | GEO

Arabidopsis thaliana strain:Columbia (Col-0) Transcriptome or Gene expression

Project description:This study investigates extent and functional significance of alternative splicing in Arabidopsis thaliana defense against the bacterial pathogen Pseudomonas syringae pv tomato (Pst). We have provided a detailed characterization of the Arabidopsis thaliana transcriptional response to Pseudomonas syringae infection in both susceptible and resistant hosts. We carried out two independent inoculation experiments (biological replicates) for each treatment. Col-0 is susceptible to virulent Pst DC3000 but has a functional RPS4 resistance gene effective against DC3000 expressing AvrRps4

2013-03-06 | E-MTAB-4450 | biostudies-arrayexpress

Molecular characterization of the submergence response of Arabidopsis thaliana ecotype Columbia

2010-11-12 | E-GEOD-24077 | biostudies-arrayexpress

Transcription profiling of Arabidopsis wild type Col-0, cry1 and hfr1 plants in response to dark and blue light treatment

Project description:micrarray profiling on Arabidopsis thaliana col-0, cry1 and hfr1 in response to dark and 1 h blue light treatment

2008-10-29 | E-MEXP-1784 | biostudies-arrayexpress

Arabidopsis thaliana strain:Columbia 0

Project description:Arabidopsis thaliana Transcriptome under Salt Stress

| PRJNA217812 | ENA

Arabidopsis thaliana

Project description:Arabidopsis thaliana transcriptome over light-dark and continuous light time-course.

| PRJNA843855 | ENA