Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Profiling of AKTP MTOs alone or coculture with colon fibroblasts

ABSTRACT: Profiling of AKTP MTOs alone or coculture with colon fibroblasts

PROVIDER: PRJNA858459 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Similar Datasets

Profiling of AKTP MTOs alone or coculture with colon fibroblasts

Project description:This array was performed to investigate the effect that colon fibroblasts have on gene expression in mouse tumor organoids.

2022-09-16 | GSE208139 | GEO

Comparison of monoculture to coculture colon cancer cell-line generated spheroids

Project description:Chromatogram library generated of pooled sample. Coculture spheroids formed from fibroblast and colon cancer cell lines, and monoculture spheroids formed from the colon cancer cell line HCT116.

2023-11-13 | MSV000093395 | MassIVE

Stem cell coculture

Project description:This study aims to to compare the gene transcription profiles of endothelial cells and stem cells, when they are cultured alone or when they are cultured together. Thus there are two major questions - how do the cells differ, and how do the cells influence each other's gene expression. Thus there are 4 types of sample: endothelial cell monoculture, endothelial cell coculture, stem cells monoculture, stem cell coculture. There are also 4 biological replicates (independent experiments) leading to 16 array data files.

2013-10-10 | E-MTAB-1536 | biostudies-arrayexpress

Normal murine fibroblasts from the colon

Project description:Normal murine fibroblasts from the colon

| PRJNA1119969 | ENA

mRNA gene expression of colon fibroblasts isolated from mouse colon

Project description:mRNA gene expression of colon fibroblasts isolated from mouse colon

| PRJNA1066266 | ENA

In vivo co-cultures of colitis-associated cancer epithelial organoids alone or with matched proximal colon fibroblasts or with matched colitis-associated cancer fibroblasts

Project description:In vivo co-cultures of colitis-associated cancer epithelial organoids alone or with matched proximal colon fibroblasts or with matched colitis-associated cancer fibroblasts

| PRJNA1221953 | ENA

Normal murine fibroblasts from the colon

Project description:In the colon, a single-layered epithelium lines the crypts, which descend into the underlying mucosa. Surrounding the crypts lies a large network of fibroblasts with diverse functions, including extracellular matrix (ECM) production and stem cell maintenance. However, functional diversity of those cells remains unexplored. To address fibroblast heterogeneity in colon homeostasis, we conducted single-cell RNA sequencing on epithelium-stripped colonic mucosal samples of aSMACre:mTmG-reporter mouse. We found 6 clusters of fibroblasts.

2025-11-28 | GSE269017 | GEO

Methylome and transcriptome sequencing to study epigenetic alterations in colon associated fibroblasts from normal, colitis and cancer associated fibroblasts

Project description:The colon cancer associated fibroblasts are part of the tumor microenvironment and has been shown to facilitate colon cancer progression by secretion of various signaling molecules and growth hormones. Similarly, the fibroblasts associated with colitic colons secrete pro-inflammatory cytokines that promote inflammation of the colon. However, the molecular mechanisms that underlie these gene expression changes in these fibroblasts is unclear. To characterize the epigenetic mechanisms that may contribute to the gene expression changes in these fibroblasts, we performed RNA-seq and MBD-isolated genome sequencing (MiGS or MBD-seq) on colon associated fibroblasts isolated from normal, colitis and cancer patients.

2022-12-29 | GSE92945 | GEO

Gene expression data of murine CD90- and CD90+ fibroblasts in the colon.

Project description:We described differential expression of CD90 in gp38+ fibroblasts in murine colon. We functionally characterized CD90- and CD90+ fibroblasts by co-culturing with intestinal organoids. CD90+ colon fibroblasts were able to support organoid growth while CD90- did not.

2018-10-27 | GSE105102 | GEO

prokaryote coculture

Project description:prokaryote coculture overview

| PRJNA1028757 | ENA