Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

SFKs overexpression suffices to change the gene expression landscape in unstimulated BJAB cells

ABSTRACT: SFKs overexpression suffices to change the gene expression landscape in unstimulated BJAB cells

PROVIDER: PRJNA877225 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR21440100.fastq.gz	Fastqsanger.gz
	SRR21440095.fastq.gz	Fastqsanger.gz
	SRR21440096.fastq.gz	Fastqsanger.gz
	SRR21440097.fastq.gz	Fastqsanger.gz
	SRR21440098.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 6

Similar Datasets

SFKs overexpression suffices to change the gene expression landscape in unstimulated BJAB cells

Project description:Whole transcriptome sequencing of untreated BJAB cells, and BJAB cells after inducing the ectopic expression of Lck or Lyn

2023-09-13 | GSE212759 | GEO

Transcriptome change after miR-206 overexpression

Project description:Transcriptome change after miR-206 overexpression

| PRJNA949651 | ENA

MeRIP sequencing analysis of BJAB cell line infected with EBV

Project description:Purpose: Evaluation of the m6A modification of EBV and BJAB transcripts during EBV infection Methods: Human B lymphoma cell line BJAB was uninfected or infected with EBV for 24 hours. Total RNA from each sample were extracted. Intact mRNA was isolated from total RNA samples and then chemically fragmented to 100-nucleoside-long fragments. m6A methylated mRNAs were immunoprecipitated with anti-N6-methyadenosine (m6A) antibody (a part of the fragmented mRNAs was kept as input). Both m6A enriched mRNAs and input mRNAs were concentrated for RNA-seq library construction. Sequencing was performed using an Illumina HiSeq 4000. Results: EBV EBNA2 and BHRF1 transcripts were m6A modified and m6A modification of BJAB transcripts changed during EBV infection. Conclusions: Our study found that some EBV transcripts were m6A modified during EBV infection and EBV infection changed m6A modification profiles of BJAB transcripts.

2021-07-10 | GSE133936 | GEO

Homo sapiens strain:BJAB

Project description:Homo sapiens strain:BJAB Transcriptome or Gene expression

| PRJNA257443 | ENA

CHIP-seq analysis about H3K9me3 change after Zscan4 overexpression

Project description:CHIP-seq analysis about H3K9me3 change after Zscan4 overexpression

| PRJNA746248 | ENA

DMS probing of and sequencing of the EBV infected BJAB-B1 transcriptome

Project description:To gain in cellulo, experimentally derived RNA structural information within the BJAB-B1 transcriptome

2022-08-06 | GSE210478 | GEO

MCF10A 24h unstimulated

Project description:Gene expression after cell culture, 24h unstimulated

| EGAD00010001962 | EGA

MCF10A 12h unstimulated

Project description:Gene expression after cell culture, 12h unstimulated

| EGAD00010001961 | EGA

Change in translation efficiency by RNG140-GFP overexpression in CHO cells

Project description:Change in translation efficiency by RNG140-GFP overexpression in CHO cells

| PRJNA594947 | ENA

KSHV LANA upregulates the expression of EGFL7 proteins in BJAB cells

Project description:The objective of this study was to determine the effects of LANA on the expressions of the cellular genes. BJAB cells were transduced with lentiviral vector expressing LANA or the control vector, total RNA was extracted for the detection of relative expression of cellular genes in LANA expressing cells.

2016-06-09 | E-GEOD-82184 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data