Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Genome sequencing of the Lumpy Skin Disease virus from the 2022 outbreak in Rajasthan

PROVIDER: PRJNA880745 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR21590382_1.fastq.gz	Fastqsanger.gz
	SRR21590382_2.fastq.gz	Fastqsanger.gz
	SRR21590383_1.fastq.gz	Fastqsanger.gz
	SRR21590383_2.fastq.gz	Fastqsanger.gz
	SRR21590384_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 12

Similar Datasets

Project description:Lumpy Skin Disease virus sequencing

| PRJNA639698 | ENA

Lumpy skin disease virus

Project description:Lumpy skin disease virus Genome sequencing and assembly

| PRJNA998208 | ENA

Project description:Lumpy skin disease virus sequencing in Indonesia

| PRJNA1140204 | ENA

Host transcriptome response to Lumpy Skin Disease (LSD) infection depends on the challenging virus strain

Project description:Ten cattle have been challenged with two Lumpy Skin Disease Virus (LSDV). They were sampled for whole blood immediately before (pre) and three and seven days after (post) infection challenge with two virus strains (H vs. O). The whole RNA-sequencing was done, and 150bp paired reads were assembled as the transcriptome. It was then computationally analyzed to find the differentially expressed genes (DGE) that enrich the gene ontology (GO) terms and KEGG pathways. Depending on the challenged LSDV strain, they influence the host response differently.

2023-06-15 | E-MTAB-12965 | biostudies-arrayexpress

Lumpy skin disease virus

Project description:Lumpy skin disease virus Raw sequence reads

| PRJNA1039145 | ENA

Lumpy skin disease virus strain:COVASU

Project description:Lumpy skin disease virus strain:COVASU Genome sequencing and assembly

| PRJNA1157559 | ENA

Project description:Whole Genome Sequencing of Lumpy skin disease virus (LSDV) from Bangladesh

| PRJNA1126022 | ENA

Project description:Lumpy skin disease virus, complete genome, Kashmir (J&K) India

| PRJNA932167 | ENA

Lumpy skin disease virus