Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Characterization of RNAs captured through a new engineered protein-mediated affinity purification

ABSTRACT: Characterization of RNAs captured through a new engineered protein-mediated affinity purification

PROVIDER: PRJNA884313 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR21709356_1.fastq.gz	Fastqsanger.gz
	SRR21709356_2.fastq.gz	Fastqsanger.gz
	SRR21709357_1.fastq.gz	Fastqsanger.gz
	SRR21709357_2.fastq.gz	Fastqsanger.gz
	SRR21709358_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 8

Similar Datasets

Characterization of RNAs captured through a new engineered protein-mediated affinity purification

Project description:We generated a new recombinant protein HARD (High-affinity RNA-binding Domain) with non-sequence-specific high-affinity on RNAs and developed the immobilized-HARD protein-mediated RNA affinity purification approach (HARD-AP).We showed that HARD-AP successfully captured all RNA biotypes.

2024-08-23 | GSE214173 | GEO

RNAs associated with affinity captured LINE-1 ribonucleoproteins

Project description:RNAs associated with affinity captured LINE-1 ribonucleoproteins

| PRJNA423015 | ENA

Affinity purification of ribosomes and associated RNAs from stress-treated cells using tagged Rpl16a and Rpl16b

Project description:This SuperSeries is composed of the following subset Series: GSE13653: Affinity purification of ribosomes and associated RNAs from stress-treated cells GSE13654: Affinity purification of ribosomes and associated RNAs using tagged Rpl16a and Rpl16b Refer to individual Series

2010-06-25 | E-GEOD-13682 | biostudies-arrayexpress

MS2-affinity purification coupled with RNA sequencing (MAPS) reveals S. aureus RsaG sRNA targetome

Project description:MS2-affinity purification coupled with RNA sequencing (MAPS) reveals S. aureus RsaG sRNA targetome. Affinity purification of in vivo regulatory complexes coupled with high throughput RNA sequencing methodology or MAPS standing for “MS2 affinity purification coupled to RNA".

2024-06-01 | GSE176028 | GEO

DNA affinity purification sequencing (DAP-seq) data of LEAFY (LFY)

Project description:In this study, we use DNA affinity purification sequencing to identiy genome-wide binding of LFY transcription factor, a master regulator of flower development in Arabidopsis. We generated two sets of data, one using genomic DNA from plant tissue, thus retain DNA methylation, as probe for DNA affinity purification (DAP-seq dataset), and the other using PCR amplified genomic DNA (without DNA methylation; AmpDAP-seq dataset).

2021-03-25 | GSE160013 | GEO

RNAs associated with affinity captured LINE-1 ribonucleoproteins

Project description:RNAs extracted from affinity enriched L1 RNPs were subjected to next-gen RNA-seq

2017-12-20 | GSE108270 | GEO

DNA affinity purification sequencing of ClNAC56 and genomic DNA

Project description:DNA affinity purification sequencing of ClNAC56 and genomic DNA

| PRJNA782543 | ENA

MS2-affinity purification coupled with RNA sequencing (MAPS) revealed MicF sRNA targetome.

Project description:In this study, we performed MAPS (MS2-affinity purification coupled with RNA sequencing) to draw the interacting map of MicF small regulatory RNA in vivo.

2023-03-05 | GSE113584 | GEO

Snorkel-tag Based Affinity Chromatography for Recombinant Extracellular Vesicle Purification

Project description:Snorkel-tag Based Affinity Chromatography for Recombinant Extracellular Vesicle Purification

| PRJNA1055540 | ENA

DNA affinity purification sequencing (DAP-seq) data of LEAFY (LFY)

Project description:DNA affinity purification sequencing (DAP-seq) data of LEAFY (LFY)

| PRJNA671605 | ENA