Ontology highlight
ABSTRACT:
PROVIDER: PRJNA884397 | ENA |
REPOSITORIES: ENA
Dataset's files
| Action | DRS | |||
|---|---|---|---|---|
| SRR21713620_1.fastq.gz | Fastqsanger.gz | |||
| SRR21713620_2.fastq.gz | Fastqsanger.gz | |||
| SRR21713621_1.fastq.gz | Fastqsanger.gz | |||
| SRR21713621_2.fastq.gz | Fastqsanger.gz | |||
| SRR21713622_1.fastq.gz | Fastqsanger.gz |
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Project description:To characterize the PTI response of tomato and the effect of the delivery of a subset of effectors, we performed an RNA-seq analysis of tomato Rio Grande prf3 leaves challenged with either the flgII-28 peptide or the following bacterial strains: Agrobacterium tumefaciens GV2260, Pseudomonas fluorescens 55, Pseudomonas putida KT2440, Pseudomonas syringae pv. tomato (Pst) DC3000, Pst DC3000 deltahrcQ-U deltafliC and Pst DC3000 deltaavrPto deltaavrPtoB. NOTE: Samples in SRA were assigned the same sample accession. This is incorrect as there are different samples, hence âSource Nameâ was replaced with new values. Comment[ENA_SAMPLE] contains the original SRA sample accessions.
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