Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Soil 16S and ITS amplicon sequences from Savannah River Site, South Carolina

ABSTRACT: 16S and ITS amplicon data of Savannah River Site, South Carolina soils Raw sequence reads

PROVIDER: PRJNA898410 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR23872700_1.fastq.gz	Fastqsanger.gz
	SRR23872700_2.fastq.gz	Fastqsanger.gz
	SRR23872800_1.fastq.gz	Fastqsanger.gz
	SRR23872800_2.fastq.gz	Fastqsanger.gz
	SRR23872900_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 1052

Similar Datasets

16S rRNA Amplicon Sequencing of Urban Prokaryotic Communities in the South Bronx River Estuary.

Project description:Biodiversity monitoring is an essential component of restoration efforts. We sequenced 16S rRNA gene amplicons from sediments and waters of Hunts Point Riverside Park and Soundview Park, located in a historically degraded but recovering urban estuary in New York. In total, 16,165 unique amplicon sequence variants were recovered, and Proteobacteria was the dominant phylum.

| S-EPMC7256250 | biostudies-literature

16S rRNA Gene Amplicon Sequencing of Contaminated Coastal Sediment Collected from the Taehwa River Estuary, South Korea.

Project description:The Taehwa River Estuary is one of the largest enclosed bays in east Korea. In order to understand the environment of the Taehwa River Estuary, the microbial diversity in the sediment of the estuary was investigated through 16S rRNA gene sequencing. The predominant phyla in all locations were Proteobacteria and Bacteroidetes.

| S-EPMC8142568 | biostudies-literature

Hearing loss in adults from South Carolina

Project description:DNA from ten individuals from South Carolina with progressive hearing loss will be subjected to exome sequencing

| EGAS00001000157 | EGA

16S rRNA amplicon ------river

Project description:Longitudinal changes of microbial communities in water and sediments along Xiangjiang River

| PRJNA562110 | ENA

Porzana carolina

Project description:Porzana carolina

| PRJNA814975 | ENA

Terrapene carolina

Project description:Terrapene carolina

| PRJNA1138435 | ENA

Soil 16S amplicon sequences

Project description:Soil microbiome dynamics after fertilization with organic versus mineral fertilization

| PRJNA688413 | ENA

Terrapene carolina

Project description:Terrapene carolina overview

| PRJNA926782 | ENA

Hypersaline roof-top mesocosm Charleston, South Carolina

Project description:Hypersaline roof-top mesocosm Charleston, South Carolina Raw sequence reads

| PRJNA1037157 | ENA

Whole Genome Sequences of 18th century African descended individuals from Charleston, South Carolina.

Project description:This study presents Whole Genome Sequencing results from the Anson Street African Burial Ground Project, which is a community-based initiative aimed at understanding the histories of 37 Ancestors found during construction in Charleston, South Carolina. Here we report fastq files for all 37 Ancestors. DNA was extracted at the University of Tennessee-Knoxville following Dabney et al. 2013, and dual index libraries prepared using a modified NEBNext Ultra II kit with partial USER enzyme digestion. Libraries were then enriched for human genomic DNA (MyBaits) and sequenced on Illumina Platforms.

| EGAS00001006693 | EGA

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data