Bombax ceiba
Ontology highlight
ABSTRACT:
PROVIDER: PRJNA908649 | ENA |
REPOSITORIES: ENA
Similar Datasets
Project description:Single-cell analysis for B. ceiba fibre fiber initiation
| PRJNA1058188 | ENA
Project description:Ceiba pentandra Genome sequencing and assembly
| PRJNA908642 | ENA
Project description:Bombax ceiba is a beautiful and deciduous tree with important economic and ecological values. Here, we sequenced the intact mitochondrial genome (mitogenome) of B. ceiba on the PacBio sequencing platform (Pacific Biosciences, Menlo Park, CA). The mitogenome is 594,390 bp and is comprised of 35 protein-coding genes, two rRNA genes, and 25 tRNA genes. The phylogeny analysis suggested that B. ceiba was closely clustered with the genus Gossypium.
| S-EPMC7800617 | biostudies-literature
Project description:Ceiba aesculifolia Transcriptome or Gene expression
| PRJNA561202 | ENA
Project description:PREMISE OF THE STUDY:Bombax ceiba (Malvaceae), commonly known as silk cotton tree, is a multipurpose tree species of tropical forests. Novel expressed sequence tag-simple sequence repeat (EST-SSR) markers were developed and characterized for the species using transcriptome analysis. METHODS AND RESULTS:A total of 33 new EST-SSR markers were developed for B. ceiba, of which 13 showed polymorphisms across the 24 individuals from four distant populations tested in the study. The results showed that the number of alleles per polymorphic locus ranged from two to four, and the expected heterozygosity and observed heterozygosity per locus varied from 0.043 to 0.654 and from 0 to 0.609, respectively. CONCLUSIONS:These newly developed EST-SSR markers can be used in phylogeographic and population genetic studies to investigate the origin of B. ceiba populations. Furthermore, these EST-SSR markers could also greatly promote the development of molecular breeding studies pertaining to silk cotton tree.
| S-EPMC4406838 | biostudies-literature