Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: xj wild forest

PROVIDER: PRJNA916194 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR22895100.fastq.gz	Fastqsanger.gz
	SRR22895101.fastq.gz	Fastqsanger.gz
	SRR22895102.fastq.gz	Fastqsanger.gz
	SRR22895103.fastq.gz	Fastqsanger.gz
	SRR22895104.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 30

Similar Datasets

Project description:xj wild forest

| PRJNA916915 | ENA

Project description:Xinjiang wild forest

| PRJNA916847 | ENA

Project description:xin jiang wild forest

| PRJNA916342 | ENA

Two Eutrema salsugineum ecotypes ESI-MS/MS

Project description:Salt cress (Eutrema salsugineum, synonymously Thellungiella salsuginea) is an extremophile, a close relative of Arabidopsis. In order to understand the selective mechanisms that shape their complex traits underlying natural variation, we analyzed the physiological and proteomic differences between Shandong (SD) ecotype and Xinjiang (XJ) ecotype.

2022-08-11 | PXD018751 | Pride

Single-nucleus transcriptomics and chromatin accessibility analysis of musk gland in Chinese forest musk deer

Project description:The Chinese forest musk deer (FMD; Moschus berezovskii) is an endangered artiodactyl mammal. Musk secreted by the musk gland of male FMD has extremely high economic and medicinal value. At present, little is known about the development of musk glands and the molecular mechanism of musk secretion. In the present research, using snRNA-seq and snATAC-seq association analysis performed on musk glands of forest musk deer, coupled with several bioinformatics analyses, the dynamic transcriptional cell atlas of musk gland development was revealed and the genes and transcription factors affecting musk secretion were determined. Based on uniform manifold approximation and projection (UMAP) analysis, we identified 12 cell types from musk glands, including two different acinar cells (clusters 0 and 10). In addition, the expression of core target genes and core transcription factors was verified by fluorescence in situ hybridization and immunohistochemistry. Combined with weighted gene co-expression network analysis (WGCNA), we obtained a deeper biological understanding of the relationship between core transcription factors, differentially expressed genes and musk secretion related pathways. This study lays a foundation for improving musk yield and meeting market demand. In the meantime, it also contributes to reducing the hunting and poaching of wild forest musk deer, protecting forest musk deer resources and maintaining ecological balance.

2023-08-31 | GSE182087 | GEO

Klebsiella pneumoniae strain:XJ-K2

Project description:Klebsiella pneumoniae strain XJ-K2 Genome sequencing

| PRJNA489756 | ENA

Pediococcus acidilactici strain:XJ-24

Project description:Pediococcus acidilactici strain:XJ-24 Genome sequencing

| PRJNA1174130 | ENA

Klebsiella pneumoniae strain:XJ-K1

Project description:Klebsiella pneumoniae strain:XJ-K1 Genome sequencing

| PRJNA489400 | ENA

Saccharomonospora xinjiangensis XJ-54

Project description:Saccharomonospora xinjiangensis XJ-54 genome sequencing project

| PRJNA62221 | ENA

Transcriptome profiling of lung immune responses potentially related to acute respiratory distress syndrome in forest musk deer

Project description:ARDS-mediated lung transcriptome alterations were identified in forest musk deer. Moreover, multiple transcripts/genes involved in lung development and lung defense responses to bacteria/viruses/fungi in ARDS were filtered out in forest musk deer.

2022-10-19 | GSE191259 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data