Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Scenedesmus sp. KT-U isolate:KT-U

ABSTRACT: RNA sequencing of microalgae, Scenedesmus sp. KT-U under control and biowaste conditions.

PROVIDER: PRJNA935134 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR24187742_1.fastq.gz	Fastqsanger.gz
	SRR24187742_2.fastq.gz	Fastqsanger.gz
	SRR24187743_1.fastq.gz	Fastqsanger.gz
	SRR24187743_2.fastq.gz	Fastqsanger.gz
	SRR29700036_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 8

Similar Datasets

Scenedesmus

Project description:Scenedesmus sp. overview

| PRJNA475816 | ENA

Scenedesmus sp. KT-U isolate:KT-U

Project description:Genome sequencing of microalgae

| PRJNA953859 | ENA

Polaribacter sp. KT 15 strain:KT 15

Project description:Polaribacter sp. KT 15 strain:KT 15 Genome sequencing

| PRJNA340740 | ENA

Scenedesmus sp. IITRIND2

Project description:Comparative de novo transcriptomics of untreated (control) and cadmium treated Scenedesmus sp. IITRIND2

| PRJNA1020810 | ENA

Scenedesmus sp. CYB3

Project description:Scenedesmus sp. CYB3 Genome sequencing and assembly

| PRJNA279341 | ENA

Scenedesmus sp. PABB004

Project description:Scenedesmus sp. PABB004 Genome sequencing and assembly

| PRJNA637367 | ENA

Scenedesmus vacuolatus

Project description:Scenedesmus vacuolatus overview

| PRJNA492689 | ENA

Scenedesmus quadricauda

Project description:Scenedesmus quadricauda overview

| PRJNA629622 | ENA

The mechanism of infochemicals induced colony formation and flocculation in the microalga Scenedesmus subspicatus

Project description:Daphnia infochemicals can induce defensive responses in microalgae Scenedesmus spp., including colony formation and flocculation. We investigated the phenomenon using a combination of microalgal biology, physiological ecology, and quantitative isobaric tagging (iTRAQ) proteomics. We have discovered that flocculation as a defense response occurs at the early ‘alarm’ phase and requires increased energy resources, with an important role proposed in cysteine synthesis. It appears to be initially stimulated by the production of an extracellular matrix (mainly composed ofby polysaccharides and fatty acids), and later sustained at the ‘acclimation’ stage through Mitogen-activated protein kinase (MAPK) signalling cascades. Defensive strategies leading to colony formation required investment into fatty acids metabolism, to ensure the accurate separation of membranes during cell division. Furthermore, higher energy demands were required at the alarm phase which subsequently decreased at the acclimation stage, thus suggesting a trade-off between colony formation and support of floc form.

2020-05-06 | PXD014153 | Pride

Pseudomonas sp. KT-90

Project description:Pseudomonas sp. KT-90 Genome sequencing

| PRJNA355947 | ENA