Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: DNA Methylation of Murine Hearts in the Hybrid Mouse Diversity Panel

PROVIDER: PRJNA947937 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR23947000.fastq.gz	Fastqsanger.gz
	SRR23947100.fastq.gz	Fastqsanger.gz
	SRR23947200.fastq.gz	Fastqsanger.gz
	SRR23947001.fastq.gz	Fastqsanger.gz
	SRR23947101.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 266

Similar Datasets

Heart profiling HMDP

Project description:Identify genes in the heart whose expressions under genetic regulation in the hybrid mouse diversity panel. The hybrid mouse diversity panel is comprised of classical inbred and recombinant inbred wild type mice. The RMA values of genes were used for genome wide association as described in Bennett et al Genome Research 2010. These data used to identify candidate genes at loci associated with atherosclerosis.

2018-02-16 | GSE77263 | GEO

Epididymal Adipose Tissue Profiling In HMDP

Project description:Identify genes in the epididymal adipose tissue whose expression is under genetic regulation in the hybrid mouse diversity panel. The hybrid mouse diversity panel is comprised of classical inbred and recombinant inbred wild type mice. The RMA values of genes were used for genome wide association as described in Bennett et al Genome Research 2010. These data are used to identify candidate genes at loci associated with obesity and dietary responsiveness.

2013-01-09 | GSE42890 | GEO

Epididymal Adipose Tissue Profiling In HMDP

2013-01-09 | E-GEOD-42890 | biostudies-arrayexpress

Small RNA sequencing of hearts from female mice on high fat diet, from 85 strains

Project description:We used small RNA-Seq to characterize heart non-coding RNAs in 85 inbred strains of mice from the Hybrid Mouse Diversity Panel (HMDP), a reference resource population for cardiovascular and metabolic traits.

2023-01-01 | GSE207142 | GEO

Mus musculus

Project description:DNA methylation profiling of nenonatal murine hearts

| PRJNA282972 | ENA

Mus musculus

Project description:Hybrid Mouse diversity Panel Liver Expression Profile

| PRJNA117535 | ENA

HDL proteome across 93 mouse strains

Project description:High-density lipoproteins (HDL) are nanoparticles with >80 associated proteins, phospholipids, cholesterol and cholesteryl esters. We have identified and quantified the ultracentrifugation isolated HDL proteome across 93 strains of mice, a diverse inbred strains of mice, Hybrid Mouse Diversity Panel (HMDP).

2019-04-24 | PXD009473 | Pride

Proteomic analysis of the cardiac muscle from the HMDP

Project description:Mitochondria play a key role in the normal function of the heart as well as in the pathogenesis of diseases. We report analysis of common genetic variations contributing to mitochondrial and heart functions using an integrative proteomics approach in a panel of inbred mouse strains called the Hybrid Mouse Diversity Panel (HMDP). We performed a whole heart proteomic analysis in the HMDP (72 strains, n=2-3 mice) and retrieved 840 mitochondrial proteins (quantified in ≥50 strains).

2023-06-01 | PXD036398 | Pride

Mus musculus

Project description:Bone microarray profiles from the Hybrid Mouse Diversity Panel

| PRJNA138591 | ENA

PolyA-selected RNA expression in whole brains of male BN-Lx/CubPrin and SHR/OlaIpcvPrin

Project description:As part of the PhenoGen Project (http://phenogen.org), RNA-Seq data has been collected from whole brain samples of two inbred strains that represent the parental strains from the HXB/BXH recombinant inbred panel, which is part of the Hybrid Rat Diversity Panel. Processed data were generated as part of manuscript, Aptardi predicts polyadenylation sites in sample-specific transcriptomes using high throughput RNA sequencing and DNA sequence.

2021-02-04 | GSE166117 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data