Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Aldafermin-producing E.coli Nissle 1917 effects on liver and adipose tissue gene expression profile of NAFLD mouse model

ABSTRACT: Aldafermin-producing E.coli Nissle 1917 effects on liver and adipose tissue gene expression profile of NAFLD mouse model

PROVIDER: PRJNA970675 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR24477100_1.fastq.gz	Fastqsanger.gz
	SRR24477100_2.fastq.gz	Fastqsanger.gz
	SRR24477101_1.fastq.gz	Fastqsanger.gz
	SRR24477101_2.fastq.gz	Fastqsanger.gz
	SRR24477102_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 60

Similar Datasets

Aldafermin-producing E.coli Nissle 1917 effects on liver and adipose tissue gene expression profile of NAFLD mouse model

Project description:To investigate aldafermin-producting E.Coli Nissle 1917 effects in combination with dietary changes in NAFLD mouse model.

2023-10-31 | GSE232030 | GEO

Caco-2 cells cocultured with E.coli Nissle 1917

Project description:Confluent Caco-2 cells cultured over 6 hours non-treated with E.coli Nissle 1917 (GSM40938 and GSM40941). Confluent Caco-2 cells cocultured over 6 hours with E.coli Nissle 1917 (GSM40881 and GSM40937). Keywords: parallel sample

2005-03-02 | GSE2232 | GEO

Transcription profiling of human Caco-2 cells cocultured with E.coli Nissle 1917

Project description:Confluent Caco-2 cells cultured over 6 hours non-treated with E.coli Nissle 1917; (GSM40938 and GSM40941). Confluent Caco-2 cells cocultured over 6 hours with E.coli Nissle 1917 (GSM40881 and GSM40937).

2008-06-12 | E-GEOD-2232 | biostudies-arrayexpress

Differential gene expression in colon organoids isolated from germ-free, E.coli strains Nissle 1917 and O6K13 monoassociated, and conventionally reared mice

Project description:Commensal microbiota contribute to gut homeostasis and influence gene expression. Intestinal organoid culture closely represent intestinal epithelium and retain intestinal stem cells and dynamic recovery capabilities as well as all major cell types of the intestinal epithelium. We established organoid culture using colon crypts isolated from germ-free (GF), and gnotobiotic mice monocolonized either with the E.coli strain O6K13 (O) or Nissle 1917 strain (N). The expression profiles of these organoids were compared to the organoid culture isolated from conventionally reared (CR) mice in order to disclose genes differentially expressed in response to the change in the intestinal microflora composition.

2019-09-13 | E-MTAB-7723 | biostudies-arrayexpress

Differential gene expression in mucosa of the small intestine and colon from germ-free, E.coli strains Nissle 1917 and O6K13 monoassociated, and conventionally reared mice

Project description:Commensal microbiota contribute to gut homeostasis and influence mucosal gene expression. We harvested mucosal lining of middle and distal part of the small intestine and colon from germ-free (GF) and gnotobiotic mice monocolonized either with the E.coli strain O6K13 (O) or Nissle 1917 strain (N). The expression profiles of the mucosa samples were compared to the corresponding tissue isolated from conventionally reared mice in order to disclose genes differentially expressed in response to the change in the intestinal microflora composition.

2019-09-13 | E-MTAB-7726 | biostudies-arrayexpress

E. coli Nissle 1917 transcriptional response after treatment with Calprotectin

Project description:To determine whether calprotectin can elicit any transcriptional response in the probiotic E. coli Nissle 1917(EcN), EcN was treated with 200 ug/g of calprotectin in log phase.

2023-08-16 | GSE211418 | GEO

Escherichia coli Nissle 1917

Project description:Escherichia coli Nissle 1917 proteome

| PRJNA71129 | ENA

RNA sequencing of Escherichia coli Nissle 1917 after HOCl stress

Project description:RNA sequencing of Escherichia coli Nissle 1917 before and after HOCl treatment was perfomed to identify pathways that may be important in responding to oxidative stress caused by reachive chlorine species (RCS).

2020-01-23 | GSE144068 | GEO

Comparative genomic hybridization by array of E. coli strains CFT073, Nissle 1917 and ABU 83872

Project description:CGH analysis of CFT073, Nissle 1917 and ABU 83972

2010-06-09 | E-MTAB-212 | biostudies-arrayexpress

Escherichia coli Nissle 1917

Project description:Escherichia coli Nissle 1917 Genome sequencing

| PRJNA248167 | ENA