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Analysis of gene expression changes in K562 erythroleukemia cells after erythroid differentiation caused by incubation in the presence hemin [RNA-Seq]

ABSTRACT: Analysis of gene expression changes in K562 erythroleukemia cells after erythroid differentiation caused by incubation in the presence hemin [RNA-Seq]

PROVIDER: PRJNA971911 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR24523467.fastq.gz	Fastqsanger.gz
	SRR24523468.fastq.gz	Fastqsanger.gz
	SRR24523469.fastq.gz	Fastqsanger.gz
	SRR24523470.fastq.gz	Fastqsanger.gz

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K562 erythroleukemia cells after erythroid differentiation caused by incubation in the presence of hemin

Project description:K562 erythroleukemia cells after erythroid differentiation caused by incubation in the presence of hemin

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Analysis of inter-chromosomal rDNA-associated contact changes in K562 erythroleukemia cells after erythroid differentiation caused by incubation in the presence of hemin [4C]

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Analysis of gene expression changes in K562 erythroleukemia cells after erythroid differentiation caused by incubation in the presence hemin [RNA-Seq]

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Expression data from K562 hemin differentiation

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Transcription profiling of human erythroleukemia K562 cells during TPA-induced megakaryocyte differentiation

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2009-09-01 | E-MEXP-2213 | biostudies-arrayexpress

Analysis of inter-chromosomal rDNA-associated contact changes in K562 erythroleukemia cells after erythroid differentiation caused by incubation in the presence of hemin [4C]

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Transcription profiling timecourse of human K562 cell line exposure to hemin

Project description:K562 cells (duplicate cultures A & B) are treated with 50 micromolar hemin for 0, 6, 12, 24, 48, 72 hours followed by RNA extraction and gene expression profiling on Affymetrix human U133A arrays and analysis by MAS 5.0

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Expression profile of hemin induced erythroid differentiation, over-expressing and knocking-down GATA-1, EKLF and NF-E2 in K562s

Project description:we profiled miRNA gene expression with the Illumina hybridization system in K562 cells induced by hemin and K562 cells with over-expressing or knocking-down GATA-1, EKLF or NF-E2 treatments. To find differential expression miRNAs, we profiled miRNA gene expression with the Illumina hybridization system in untreated, hemin-treated 48h and 72h K562 cells. To define GATA-1, EKLF or NF-E2 directly targeted miRNA genes, a comprehensive analysis of TF induced miRNA gene expression changes was performed using over-expressing or knocking-down TFs in K562 cells and illumina miRNA profiling Beadchip system.

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